| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2656 |
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| Symbol | |
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| ID | 4077567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2791376 |
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| End bp | 2792497 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007980 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | YP_614650 |
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| Protein GI | 99082496 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGA ACATCTGTGT TGTGGGCGCG GGCAAGATCG GCCAGGCGAT TGCCACGTTT
TTAAAGACAT CTGCCAACTA TCAGGTGACC CTCGCGGATC ATGACCTGAA TGCGCTGGGC
GCGGTGGCGG AGCTGGGGGT GCCGACCCGG CAGATCGACG CCAAGGATCC GGTGTCGCTG
GCAAAGGGGC TTCAGGGGTT TGACGCGGTG ATTTCTGCCG CGCCGTTCTT TTTGACGCCA
ATGATAGCGG AGGCCGCAAA AACCGCCGGC GCGCATTATT TCGACCTCAC CGAGGATGTG
GCCGCCACCG AAGCGGTGCG CAAACTGGCC GAAGGCAGCG AGACGGTGTT CATGCCCCAG
AGCGGCCTTG CGCCCGGTTT CGTGGGCATC GCGGGCGCGT CACTGGCGGC AGAATTCGAT
GAGCTGGACA GCCTGCACAT GCGGGTCGGC GCGCTGCCGA AGTTTCCGAC CAACGCGTTG
AAATATAATC TCACCTGGTC CACCGACGGG CTGATCAACG AGTATTGCAA CCCCTGCGAT
GCCATCGTGA ATGGCGCGCG CACCAAGACA GCGCCGCTCG AAGATTACGA GCGTCTGAGC
CTTGATGGGG TTGAGTATGA ATGCTTCAAC ACCTCGGGTG GGCTTGGCAC CTTGCCAGAG
ACGCTGGACG GGAAGGCGCG GGCGGTCTCG TATCGGTCGA TCCGCTATCC CGGTCACTGC
GACATCCTGA AAATGCTGCT GCATGATCTG GGGCTGGAAC GCCGCCGCGA CCTGATGAAA
GAGATTTTCG AGAGCGCATT GCCGCGCACC GATCAGGACG TGGTGCTGGT CTATTGCACC
GCGCGGGGCC GCATCAATGG CGAGCTGCGT GAAAAGAGCC TCATCAACAA GAGCTATGCC
CGCCAGATCG GCGGCAAGAC CTGGAGCGCG ATCCAAGTCA CCACCACCGC CGGGGTGCTG
GGGGTTGTGG ATCTGGTGCG GCAAGGCGTC CTGCCCGCGC GCGGCTTTGT AAGCCAGGAA
CAGGTGAAGC TGCAGGACTT CCTCGAGACA GAATTTGGCC AGCTCTACCG GGCGGGCGAC
ATCGACCACA TGACAGACAC AACAAAATTG GCAGCTGAGT GA
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| Protein sequence | MQWNICVVGA GKIGQAIATF LKTSANYQVT LADHDLNALG AVAELGVPTR QIDAKDPVSL
AKGLQGFDAV ISAAPFFLTP MIAEAAKTAG AHYFDLTEDV AATEAVRKLA EGSETVFMPQ
SGLAPGFVGI AGASLAAEFD ELDSLHMRVG ALPKFPTNAL KYNLTWSTDG LINEYCNPCD
AIVNGARTKT APLEDYERLS LDGVEYECFN TSGGLGTLPE TLDGKARAVS YRSIRYPGHC
DILKMLLHDL GLERRRDLMK EIFESALPRT DQDVVLVYCT ARGRINGELR EKSLINKSYA
RQIGGKTWSA IQVTTTAGVL GVVDLVRQGV LPARGFVSQE QVKLQDFLET EFGQLYRAGD
IDHMTDTTKL AAE
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