| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2615 |
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| Symbol | |
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| ID | 4077526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2748232 |
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| End bp | 2749446 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007939 |
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| Product | major facilitator transporter |
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| Protein accession | YP_614609 |
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| Protein GI | 99082455 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.164819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG CCCCTTCCAC CCTGCCTGCG CTGGACCGTC GCGCGGTTGC GCTGTTGCTC
GCCGCGACGC TAACGACCAT GGCCAATGCC GCCATCAGCC CCGCCCTGCC CGGCCTGGAG
GCCCGGTTTG CCGACCACCC GCAGGCGGCC CTTCTGACAC GTTTCCTGGT GCCCGCGCCC
TCGGTGGCGG TGGTGCTGAT CGCGGGGTGG GCCGGTGTAC TGGCGGATCG ACTGGGTCGT
CGTCCGATGT TGATTGGTGG AGTGCTGCTC TTTGCGCTGG CCGGTAGCCT CGGCATGGTC
CTGGGCAGCC TTGAGGCGAT CCTCTTGAGC CGCCTCGCCC TTGGGGTGGC AGTGGCCCTC
ATCATGACAG CGCAGACCGC TCTTATTGCG GACTACTTCG ACGGCGCGGC CCGCAGTCGC
GTTCTGGGGC TGCAAATCTC GGCCCGAAAC CTCGGCGGGC TGGTGTCGAT CACCCTTGCG
GGCGTGCTCG CCCTGATGTC GCCCATGCAT GCGTTTGCGA TCCACGGACT CGCGCTCTTG
ATCCTCCCGA TCCTCTGGTG TGCGATTTCA GAGCCCAAAC GCCCCAGCCC AGCGACCACC
GCGCGCGGTG CTCCCCCTGC GACAACACAG AGGCTGGGGC TTGGTCTTTG GGCCATCGCG
GGGCTGCAAA TGCTGACCAC GATCTGCTTT TTCACCATGC CCACGCAGGT GCCGTTCTTT
GTCGCCAGTC ACGGCATCAA AAACACGGCA ATCATCGGCT CCGTGATGGG GGCGCTGACG
CTCGCGGGGA TGCTGGCGGC CACCCGCTAC AGCACGCTCA AACCCCGGCT TGGGCACGCG
CGGCTCTTTC TGCTGGGCTA TGGGCTCATG GGGCTTGGGA TGGCGGTACT GGCCCTTGCG
CCGGGTCTTG CGATGATCTT TCTGGGGGCC GCGCTGGTCG GGCTTGGCTT TGCCACCGTC
TCTCCGAATT TCAACGAAAT TGCCCTGCGC GCCGCCCCCG CAGATCTGCG CGGGCGGGCT
GCTGGGATCA TGACAACTTC GGTCTTTCTT GGGCAGATCG TCTCTCCGTT TCTGACCCTG
CCCATGGTGC GCCACGCGGG CTACTCTGGG ACCTTCGCGA CCCTTGCTGT CCTGCTTGGG
CTGGCCGCCT TGGTCGCGCT TCTGGCCTAT GGGGTCACAC GCGGCGCAAC CGATGCCGCC
GAGCGCGCCT CCTAG
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| Protein sequence | MTAAPSTLPA LDRRAVALLL AATLTTMANA AISPALPGLE ARFADHPQAA LLTRFLVPAP
SVAVVLIAGW AGVLADRLGR RPMLIGGVLL FALAGSLGMV LGSLEAILLS RLALGVAVAL
IMTAQTALIA DYFDGAARSR VLGLQISARN LGGLVSITLA GVLALMSPMH AFAIHGLALL
ILPILWCAIS EPKRPSPATT ARGAPPATTQ RLGLGLWAIA GLQMLTTICF FTMPTQVPFF
VASHGIKNTA IIGSVMGALT LAGMLAATRY STLKPRLGHA RLFLLGYGLM GLGMAVLALA
PGLAMIFLGA ALVGLGFATV SPNFNEIALR AAPADLRGRA AGIMTTSVFL GQIVSPFLTL
PMVRHAGYSG TFATLAVLLG LAALVALLAY GVTRGATDAA ERAS
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