Gene TM1040_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2581 
Symbol 
ID4077492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2718493 
End bp2719665 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content60% 
IMG OID638007905 
Productaminotransferase, class I and II 
Protein accessionYP_614575 
Protein GI99082421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000560226 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTG ACAAGATCAT CGACCGCCGC GGCACCCATT GCGCCAAATG GGACATGATG 
GAGCCTCTCT ATGGCGTCAC GCCCGAGGAT GGGTTGGCGA TGTGGGTTGC AGATACGGAT
TTTCCAGTAC CGGAAGCTGT CTCGGCCAAG ATGCGCGAAA TGGCCGATCA CGGCATCTAT
GGTTATGTGA ACTGCGAGGC GCAGTACAAG AGCGCGATTC AGTGGTGGAT GGAAAGCCGC
CACGGATGGA GCGTGGATGC AGATGCGATC TTTACCACCA CGGGTCTCGT GAACGGTGTC
GGCATGTGCC TTGACACCTT CACCCAGCCC GGGGACGGCA TCGTGCTGTT CACCCCGGTC
TATCACGCTT TTGCCAAGGT GATCCGTCTT GCGGGACGTG AGGTGGTCGA ATGCCCGATG
GTGCAGGAAG ACGGCGCCTA CAAGATGGAT TTCGACGCCT ACGATGCGCA GATGACCGGC
AAGGAAAAGA TGGTCATCCT GTGTTCGCCG CACAACCCCG GTGGCCGCGT CTGGACCCAA
GACGAGCTCA CGCAAGTTGC CGCCTTCTGC AAGCGCCATG ACCTGATGCT GATTTCGGAC
GAAATCCACC ACGACCTGGT CTTTGGGGGG CGCAAGCATC TCCCCATGGC GGTGGCCGCA
CCCGAAATCA GCGAGCGCCT GATCATGCTG ACAGCCCCCT CCAAGACCTT CAACTTTGCC
GGGCTGCACA CGGGGCAGGT CATCATCCCT GATGAGACGC TGCGCGAGCA GTTCCGTCGC
CGCATGATGG CCATCTATCT GCAGGGCAAT ACGGCAGGGG AATTTGCAAC CATCGCCGCC
TACTCCCCGG ATGGCGCGGC CTATGTCGAA GAGCTGGTGC CCTATATCGA GGCCAACAAG
CGCCTGTTTG ACGAAGCAGT GAATGCAATC CCAGGCCTAC AATCGATGGA GCTGCAATCC
ACATATCTGG CGTGGGTCGA CTTCTCCGGT ACAGGCATGG AGCGCGAGGA GTTCACCCGC
CGCGTTGAAC AGGGTGCACG GATCGCGGCC AACCACGGCA CCACATTTGG CACCGGCGGT
GAGAGCTTCT TGCGGTTCAA CCTCGGCACA CAGCGTGCAC GGGTCGAAGA AGCCTGCGAG
CGGCTGGCAA AGGCGTTCTC TGACTTGCAG TGA
 
Protein sequence
MDFDKIIDRR GTHCAKWDMM EPLYGVTPED GLAMWVADTD FPVPEAVSAK MREMADHGIY 
GYVNCEAQYK SAIQWWMESR HGWSVDADAI FTTTGLVNGV GMCLDTFTQP GDGIVLFTPV
YHAFAKVIRL AGREVVECPM VQEDGAYKMD FDAYDAQMTG KEKMVILCSP HNPGGRVWTQ
DELTQVAAFC KRHDLMLISD EIHHDLVFGG RKHLPMAVAA PEISERLIML TAPSKTFNFA
GLHTGQVIIP DETLREQFRR RMMAIYLQGN TAGEFATIAA YSPDGAAYVE ELVPYIEANK
RLFDEAVNAI PGLQSMELQS TYLAWVDFSG TGMEREEFTR RVEQGARIAA NHGTTFGTGG
ESFLRFNLGT QRARVEEACE RLAKAFSDLQ