Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2581 |
Symbol | |
ID | 4077492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2718493 |
End bp | 2719665 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007905 |
Product | aminotransferase, class I and II |
Protein accession | YP_614575 |
Protein GI | 99082421 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000560226 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTTG ACAAGATCAT CGACCGCCGC GGCACCCATT GCGCCAAATG GGACATGATG GAGCCTCTCT ATGGCGTCAC GCCCGAGGAT GGGTTGGCGA TGTGGGTTGC AGATACGGAT TTTCCAGTAC CGGAAGCTGT CTCGGCCAAG ATGCGCGAAA TGGCCGATCA CGGCATCTAT GGTTATGTGA ACTGCGAGGC GCAGTACAAG AGCGCGATTC AGTGGTGGAT GGAAAGCCGC CACGGATGGA GCGTGGATGC AGATGCGATC TTTACCACCA CGGGTCTCGT GAACGGTGTC GGCATGTGCC TTGACACCTT CACCCAGCCC GGGGACGGCA TCGTGCTGTT CACCCCGGTC TATCACGCTT TTGCCAAGGT GATCCGTCTT GCGGGACGTG AGGTGGTCGA ATGCCCGATG GTGCAGGAAG ACGGCGCCTA CAAGATGGAT TTCGACGCCT ACGATGCGCA GATGACCGGC AAGGAAAAGA TGGTCATCCT GTGTTCGCCG CACAACCCCG GTGGCCGCGT CTGGACCCAA GACGAGCTCA CGCAAGTTGC CGCCTTCTGC AAGCGCCATG ACCTGATGCT GATTTCGGAC GAAATCCACC ACGACCTGGT CTTTGGGGGG CGCAAGCATC TCCCCATGGC GGTGGCCGCA CCCGAAATCA GCGAGCGCCT GATCATGCTG ACAGCCCCCT CCAAGACCTT CAACTTTGCC GGGCTGCACA CGGGGCAGGT CATCATCCCT GATGAGACGC TGCGCGAGCA GTTCCGTCGC CGCATGATGG CCATCTATCT GCAGGGCAAT ACGGCAGGGG AATTTGCAAC CATCGCCGCC TACTCCCCGG ATGGCGCGGC CTATGTCGAA GAGCTGGTGC CCTATATCGA GGCCAACAAG CGCCTGTTTG ACGAAGCAGT GAATGCAATC CCAGGCCTAC AATCGATGGA GCTGCAATCC ACATATCTGG CGTGGGTCGA CTTCTCCGGT ACAGGCATGG AGCGCGAGGA GTTCACCCGC CGCGTTGAAC AGGGTGCACG GATCGCGGCC AACCACGGCA CCACATTTGG CACCGGCGGT GAGAGCTTCT TGCGGTTCAA CCTCGGCACA CAGCGTGCAC GGGTCGAAGA AGCCTGCGAG CGGCTGGCAA AGGCGTTCTC TGACTTGCAG TGA
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Protein sequence | MDFDKIIDRR GTHCAKWDMM EPLYGVTPED GLAMWVADTD FPVPEAVSAK MREMADHGIY GYVNCEAQYK SAIQWWMESR HGWSVDADAI FTTTGLVNGV GMCLDTFTQP GDGIVLFTPV YHAFAKVIRL AGREVVECPM VQEDGAYKMD FDAYDAQMTG KEKMVILCSP HNPGGRVWTQ DELTQVAAFC KRHDLMLISD EIHHDLVFGG RKHLPMAVAA PEISERLIML TAPSKTFNFA GLHTGQVIIP DETLREQFRR RMMAIYLQGN TAGEFATIAA YSPDGAAYVE ELVPYIEANK RLFDEAVNAI PGLQSMELQS TYLAWVDFSG TGMEREEFTR RVEQGARIAA NHGTTFGTGG ESFLRFNLGT QRARVEEACE RLAKAFSDLQ
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