| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2577 |
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| Symbol | |
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| ID | 4076708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2715727 |
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| End bp | 2716653 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638007901 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_614571 |
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| Protein GI | 99082417 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.4212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000800769 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGGTTA TCTTTATGGG AACGCCGGAG TTTTCGGTGC CGGTACTGGA TGCTCTTGTC
GAGGCCGGGC ACGAGATTGC GGCCGTCTAC TGCCAACCTC CGCGCCCCGC AGGTCGCGGC
AAAAAAGACC GTCCAACCCC GGTCCACGCC AGGGCCGAGG CTCTGGGGCT CGAGGTGCGC
CATCCGGTCT CACTCAAGGG GAGCGAGGAA CAACAAGCCT TTGCCGCGCT CAACGCCGAT
GTTGCCGTAG TGGTTGCCTA TGGGCTGATC CTGCCGCAGG CGGTTCTGGA CGCTCCGCGC
GCGGGATGCC TCAACATCCA TGCCAGCCTG CTGCCGCGCT GGCGCGGCGC TGCGCCGATC
CATCGTGCGA TCATGGCCGG GGACACCCAC ACCGGCATTT GCATCATGCA GATGGAAGCA
GGGCTTGATA CTGGCCCGGT GCTGCTGCGC AAGGAGACCG AGATCGGGGG CGAGGAAACC
ACAGCGGCGC TTCATGATCG TCTCTCGCTC ATGGGCGCGC GGATGATTGT GGACGCATTG
GCCACGCTAC CGGATCTGAA GGCCGAGCCG CAGCCGGAGG CGGGCGTGAC CTACGCCAGC
AAAATCGACA AGGCCGAGGC CCAGATCGAC TGGAGCGTCG CGGCAGAGGA GGTCGACCGC
AAGATTCGCG GCCTGTCCCC GTTTCCGGGC GCGTGGTTTG AGGTCGACGG CCAGCGCCTG
AAGGTGCTCG CCTCGCGTCT TGCCGAGGGC ACGGGCGCAG TGGGCACAGT GCTTGATGAC
AAGCTGACCG TGGCATGTGG CAGCGGCGCA GTGGAGCTCT TGCGGCTGCA ACGCGCTGGC
AAAGCTGCGC AGGACCGCGA GGTCTTCCTG CGCGGCTTCA CGCTCGCCAA GGGCACAAAT
CTGCTGACCG CGCAGGACGC CGAATGA
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| Protein sequence | MRVIFMGTPE FSVPVLDALV EAGHEIAAVY CQPPRPAGRG KKDRPTPVHA RAEALGLEVR
HPVSLKGSEE QQAFAALNAD VAVVVAYGLI LPQAVLDAPR AGCLNIHASL LPRWRGAAPI
HRAIMAGDTH TGICIMQMEA GLDTGPVLLR KETEIGGEET TAALHDRLSL MGARMIVDAL
ATLPDLKAEP QPEAGVTYAS KIDKAEAQID WSVAAEEVDR KIRGLSPFPG AWFEVDGQRL
KVLASRLAEG TGAVGTVLDD KLTVACGSGA VELLRLQRAG KAAQDREVFL RGFTLAKGTN
LLTAQDAE
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