Gene TM1040_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2570 
Symbol 
ID4076701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2712248 
End bp2712865 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID638007894 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_614564 
Protein GI99082410 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00200022 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.06824e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGATTTCCC TGCAATTTCT CCTGACCGCA TTTGTCGTGG TCCTCGCGCC GGGTACCGGT 
GTGATCTACA CTCTGGCTTT GGGTCTGGGG CGCGGACGCC GGGCCGCCCT CTGGGCCGCA
GTAGGCTGTA CTTTCGGTAT CCTGCCGCAT CTGATGGCCG CCACACTGGG GCTTGCGGCG
GTGCTGCATT CCTCGGCCGT GCTGTTCCAA GGCATCAAGA TCGCAGGTGT TCTCTACTTG
CTCTACCTCG CTTGGCAGAT GCTGAAATCC GATGGCGCGC TCTCGGTCTC TGCGGCACAG
CCTGCCTCAC AGCCGGGGAT TACGATCGCC AAACGTGGCG CCCTGATCAA CATTCTGAAT
CCCAAGCTCT CGATCTTCTT TCTGGCACTG CTGCCGCCGT TCCTCTCCGG CAATACAGCC
ACCGCCACGC AGGAAATGGT CGCACTTGGT GGGATCTTCA TGGCGATGAC CTTTGCCGTC
TTTGCGCTCT ACGGTCTTTT TGCCGCGCAG GCCCGCAGCC TCATTCTTGG CTCCGAGCGC
GTAGTGACAT GGCTCAATCG CAGCTTTGCC GCCATCTTTG CAGCTCTCGC GCTGCGCTTG
GCAATGGAGC GCAGCTGA
 
Protein sequence
MISLQFLLTA FVVVLAPGTG VIYTLALGLG RGRRAALWAA VGCTFGILPH LMAATLGLAA 
VLHSSAVLFQ GIKIAGVLYL LYLAWQMLKS DGALSVSAAQ PASQPGITIA KRGALINILN
PKLSIFFLAL LPPFLSGNTA TATQEMVALG GIFMAMTFAV FALYGLFAAQ ARSLILGSER
VVTWLNRSFA AIFAALALRL AMERS