Gene TM1040_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2567 
Symbol 
ID4076698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2709688 
End bp2710257 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID638007891 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_614561 
Protein GI99082407 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.2951e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.36172e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCCGAAA ACCGGTCAAC TTATCTTGTG GCTATGGGAA GTAACCTCGA GGATGAGGGT 
ACTATACCAT TAGAAATCCT GCAAATGTGC CTTGCGGAGT TATCGGGCGA AGGTTTCGAC
CTAGTGGCTG TTTCTCGTTT CTATGCAACG CCTTGCTTTC CAGCGGGCGC CGGGCCTGAT
TATGTGAATG CGGCAATTGT ATTGCGCGGC GCTTTTTCTG CGGACGAGAC ATTGCGCAGA
CTTCACAAAA TCGAGACCAA GTTTCACCGC AGAAGGCAAC AGCGCTGGGG CATGCGGACA
CTTGATCTAG ATCTTTTGGC TGTGGATCAG GAAATTGCGC CCGATATTCA GACGTTTAGC
CATTGGCACT CGCTGCCTCA AAGCGAGCAG AGGACGAAAG CACCCGAGCA TTTGATTCTG
CCGCACCCGC GTGTGCAGGA CCGTGCGTTT GTGCTTGTGC CGCTTCGGGA TATTGCCCCA
GACTGGGTGC ATCCGGTTCT CGAGCTGAGC GTCCGGGAGA TGCTGAAACG ATGTCCGGCC
TCTGATGTGG CCGAGGTGCG CGCCCTCTGA
 
Protein sequence
MAENRSTYLV AMGSNLEDEG TIPLEILQMC LAELSGEGFD LVAVSRFYAT PCFPAGAGPD 
YVNAAIVLRG AFSADETLRR LHKIETKFHR RRQQRWGMRT LDLDLLAVDQ EIAPDIQTFS
HWHSLPQSEQ RTKAPEHLIL PHPRVQDRAF VLVPLRDIAP DWVHPVLELS VREMLKRCPA
SDVAEVRAL