| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2561 |
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| Symbol | acpS |
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| ID | 4076692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2704558 |
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| End bp | 2704986 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007885 |
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| Product | 4'-phosphopantetheinyl transferase |
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| Protein accession | YP_614555 |
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| Protein GI | 99082401 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
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| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0826465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00133765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTCTCG GCATCGGTAC GGATCTGGCA AATATCGAAC GCATCCAAGG CGTGTTGGAT
CGGTTTGGCG ATCGGTTTCG CAATCGGGTT TTTACCGATG TCGAACAGGC GAAATCCGAG
CGTCGCCTCG ATGTGGCAGG CACCTACGCA AAGCGCTGGG CGGCCAAGGA GGCCTGCTCC
AAGGCGCTTG GGACCGGCCT GCGCATGGGG ATCGCGTGGA AGGACATGTC GGTTTCCAAC
CTCTCGACCG GGCAGCCGGT GATGCACGTA ACCGGTTGGG CCAAGGCGCG GCTGGATGAA
TTGACGCCGC CGGGGCATGA GGCGGTGATC CATGTGACCC TCACCGATGA TCACCCCTGG
GCACAGGCGG TCGTGATGAT CGAAGCACGT CCGATCTTGC CCGACGTCCA GACAGCACAG
ACGACATAA
|
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| Protein sequence | MILGIGTDLA NIERIQGVLD RFGDRFRNRV FTDVEQAKSE RRLDVAGTYA KRWAAKEACS
KALGTGLRMG IAWKDMSVSN LSTGQPVMHV TGWAKARLDE LTPPGHEAVI HVTLTDDHPW
AQAVVMIEAR PILPDVQTAQ TT
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