| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2548 |
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| Symbol | |
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| ID | 4076679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2689525 |
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| End bp | 2690880 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007872 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_614542 |
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| Protein GI | 99082388 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.963821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.259779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG AATCTCAATT GGCGCGGCTC GGACTTTTCG ACGCAAAGGT GCCCAGATAT
ACAAGTTACC CGACTGCGCC ACACTTCAAC AATGACGTGA GCGCAGCGCG TTTTGCCTCC
TGGATCGGGT CTATCAAGCC CGGCGCAGAA ATCTCGCTAT ACGTGCATGT GCCCTTCTGT
CGCAGGCTGT GCTGGTTTTG CGCATGCCGC ACGCAGGGCA CGCAGTCCGA GTCACCTGTG
CGCGCCTACA TAGAGGTGTT GAAGCAAGAA CTTGCGCTTC TTGCGCGTGC CCTACCCGAA
GGCGTCCGCC TTGCGCGGCT GCATTGGGGC GGCGGGACGC CCACGCTCCT CAGTGCCGAA
ATGATCTCTG ATCTGGCGGA GGCGATCTTT GCCGTGACGC CGATGGCGAA GGGCGGCGAG
TTCTCCGTTG AGATCGACCC AAATGAAATC GACGATGCGC GCCTCGACGC CCTCGCGGCG
GCGGGGATGA ACCGTGCCTC GATCGGCGTT CAGGATTTTG ACCCCCAGAT CCAGGAAACC
ATCGGTCGCA TTCAGCCTTT TGATCTGACG CGCGACGCCG TCGACATGAT CCGCGCGCGG
GGCATCACAA GCCTCAATGC AGATATTCTC TTCGGGCTGC CGCATCAGAA CCGGATGCGC
ATGACCGAAA GCGTGCAAAA ACTGCTGTCG CTCTCGCCGG ATCGCGTGGC ACTCTATGGC
TATGCCCATG TGCCATGGAT GGCGCGGCGC CAGAATATGA TTCCAACCGA CAGCCTACCG
TCACCTCAAA CCCGACTACA GTTGTTTGAG ACCGCGCAGC GATTGTTTCA GTGGGATGGC
TATCGCGAAA TTGGTATCGA CCATTTTGCC ACGCCCCACG ATGGGCTGGC GGTTGCGGCC
CGGACGGGGC GGCTGCGCCG GAACTTTCAG GGTTACACCG ATGATCGGGC AGATGTGTTG
ATCGGCCTTG GGGCATCCTC TATCTCGCGT TTTCCGCAGG GCTATGCTCA GAATGCTCCA
TCCACATCGG CCTACACCAA GGCTATTCGT GACGGACAGT TTTCCACCGC GCGCGGCCAT
GTGTTTTCGG GCGAGGATTT GCTGCGTGGG CGCATGATCG AAGCCCTGAT GTGTGATTTC
GAGATTGCAA CCGACGATAT TCGGGCACAG TTCGACATCA CGCAAGACGC ATTGGAGCGC
ATGTATCGCG AGGCCTCCGT CGCCTTTCCG GAAATGCTCG ACGTCACCCC ATCGGGGCTG
CGGGTAAGAC CCGAAGGCAA GCCCCTGACG CGAATGGTGG CGCGCCACTT TGATGCCTAT
GACCTGAGCA AGGCCGGACA TAGCTCGGCG ATCTAG
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| Protein sequence | MTQESQLARL GLFDAKVPRY TSYPTAPHFN NDVSAARFAS WIGSIKPGAE ISLYVHVPFC
RRLCWFCACR TQGTQSESPV RAYIEVLKQE LALLARALPE GVRLARLHWG GGTPTLLSAE
MISDLAEAIF AVTPMAKGGE FSVEIDPNEI DDARLDALAA AGMNRASIGV QDFDPQIQET
IGRIQPFDLT RDAVDMIRAR GITSLNADIL FGLPHQNRMR MTESVQKLLS LSPDRVALYG
YAHVPWMARR QNMIPTDSLP SPQTRLQLFE TAQRLFQWDG YREIGIDHFA TPHDGLAVAA
RTGRLRRNFQ GYTDDRADVL IGLGASSISR FPQGYAQNAP STSAYTKAIR DGQFSTARGH
VFSGEDLLRG RMIEALMCDF EIATDDIRAQ FDITQDALER MYREASVAFP EMLDVTPSGL
RVRPEGKPLT RMVARHFDAY DLSKAGHSSA I
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