| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2544 |
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| Symbol | |
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| ID | 4076675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2685136 |
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| End bp | 2685864 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007868 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_614538 |
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| Protein GI | 99082384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.775283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.821949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTC TCGACAAACA TAAAATCCTC GAGACCAACG CAACGCTTCT GCTGATCTGT
TCCTTTCTCG TGGTTACCAT CGGTGGCCTG GTACAGATCA CCCCGCTGTT CTATCTAGAG
AACACCATCG AGGAGGTGGA GGGCATGCGT CCCTACACCC CCCTCGAGCT GGCGGGGCGG
GAGATCTACA TCCGCGAAGG ATGCTACGTC TGTCACAGCC AGATGATCCG TCCGATGCGG
GATGAGGTTG AACGCTACGG TCACTATTCG CTGGCGGCGG AGTCGATGTA CGACCACCCG
CACCAGTGGG GCTCCAAGCG CACCGGGCCG GATCTGGCCC GGGTTGGCGG GCGCTACTCG
GACGAGTGGC ACGTCGATCA CCTGCGTGAC CCGCAGGCGG TTGTGCCAGA GTCGGTCATG
CCCAAGTATG ACTTCCTGGA GCGCACCCGT ATTGATGGCA AATACATCGG AGAACTGATG
GCCACCAATG CGATTGTCGG TGTCCCCTAT ACCGAGGCGA TGATCGAAGA AGCTCGTCGC
GACTTCCGCG CACAAGCCGA TCCCGACAGC GATTATGACG GGCTGCTGGA GCGCTACGGC
GAGAGCGTCA ATGTGCGCAA CTTTGATGGT CAGCCCGGTG TATCCGAGGC GGATGCATTG
ATCGCCTATC TGCAGATGCT CGGCACGTTG GTCGATTTCT CGACCTTCAC ACCCGACGCA
AGCCGCTAA
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| Protein sequence | MAILDKHKIL ETNATLLLIC SFLVVTIGGL VQITPLFYLE NTIEEVEGMR PYTPLELAGR
EIYIREGCYV CHSQMIRPMR DEVERYGHYS LAAESMYDHP HQWGSKRTGP DLARVGGRYS
DEWHVDHLRD PQAVVPESVM PKYDFLERTR IDGKYIGELM ATNAIVGVPY TEAMIEEARR
DFRAQADPDS DYDGLLERYG ESVNVRNFDG QPGVSEADAL IAYLQMLGTL VDFSTFTPDA
SR
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