Gene TM1040_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2539 
Symbol 
ID4076670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2680424 
End bp2680900 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID638007863 
ProductFixH 
Protein accessionYP_614533 
Protein GI99082379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGCG AAACCACAAA AGCACCCCGC CAGTTCACCG GCAAACATAT GCTTGCAGTC 
TGTGTGGGGG CCTTTGGGAT CATCATTTCG GTGAACCTCT ACATGGCCTA CAGCGCGGTG
AGCACGTTTC CGGGTGTCGA GGTCAAGAAC TCCTATGTTG CGAGCCAGCA ATTTGATACG
CGCCGCGCCG CGCAAGAAGC GCTGGGCTGG TCGGTCTACG CCTCGGCGAT AGGGAACGAG
GTGAAGCTCG AGATCAGCGA TCGTGACGGC CAGCCGGTTG AGGTCGCCTC GCTCACTGCG
ACGCTGGGAC GCGCCACGCA TGTCAGGGAC GATCAAAAGC CGCAGTTCCG CTTTGACGGG
TCGGCCTATG TGGCCCCCGC AGAGCTGGCC CCGGGGAACT GGAACATCCG GATGATCGCG
CGCGCCGAAG ATGGCACCGA GTTCACGCAG CGGGTGATCC TGCACGTAAA GGACTGA
 
Protein sequence
MHSETTKAPR QFTGKHMLAV CVGAFGIIIS VNLYMAYSAV STFPGVEVKN SYVASQQFDT 
RRAAQEALGW SVYASAIGNE VKLEISDRDG QPVEVASLTA TLGRATHVRD DQKPQFRFDG
SAYVAPAELA PGNWNIRMIA RAEDGTEFTQ RVILHVKD