| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2520 |
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| Symbol | uvrC |
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| ID | 4076522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2659370 |
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| End bp | 2661277 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007844 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_614514 |
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| Protein GI | 99082360 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA ATCATATGTC AGAGACTATG AACGACATCA GCGCAGAATC GCCCGACCAA
CCCGAGCCCC CCCGCACCGG ATACGGTGTC ATTCAGGCAT ACCTGAAGAC GCTTGATTCA
TCGCCGGGCG TGTACCGTAT GCTCGATCAC GAAAGCAGGG TGCTCTATGT CGGCAAGGCG
CGCAATCTGC GGGCGCGGGT GTCCAATTAC ACCCGCCCGG GACATACGCA GCGCATCGAG
ACGATGATCT CACAAACCAG CCGCATGATG TTCCTGACAA CGCGCACCGA AACCGAGGCG
CTCTTGTTGG AGCAAAACCT CATCAAGCAG CTGAAGCCCA AATACAATGT GCTGCTGCGC
GACGATAAAA GTTTTCCCTA CATCATGGTG AGCAAGAACC ATGCTTTTCC GCAGCTGAAA
AAGCACCGCG GCGCACGCAA GGGGAAGGCG AGCTTCTTTG GGCCCTTTGC CAGTGCCGGG
GCGGTGAACC GGACGTTGAA TCAGTTGCAA AAAGCGTTCT TGCTGCGCAA CTGCACAGAC
ACCATGTTTG AAAACCGCAC CCGGCCCTGC CTGCAGTATC AGATCAAACG CTGCTCTGGC
CCATGTGTGG GAAAGATCTC GCAGGCGGAT TACGCCGACA GTGTCCGGGA TGCAGAGCGG
TTTCTGGCGG GACGCTCCAC AAAGATCCAG GAAGAGCTTG GCGCTGAGAT GCAAGCCGCC
TCGGAAGCGA TGGAATATGA GCGCGCGGCA GCCTTGCGGG ACCGGATCAA GGCGCTGACG
CAGGTGCAAT CGGCGCAGGG CATCAACCCG CGTGGCGTGT CCGAGGCTGA CATCATTGGC
CTGCATTTGG AAAACGGGCT GGCCTGCGTG CAGGTGTTTT TTATTCGCGC CAATCAGAAC
TGGGGCAATC AGGACTTCTA CCCGCGCGTG GCCGAGGATA TGTCCGCCGC CGAAGTCATG
GAGGCTTTCA TTGGCCAGTT CTATGACAAC AAGGATGTTC CACGTCAGCT CATCTTGTCG
GATGACATCG AAAACGCAGA TCTGATGGCT GTGGCACTCA GTGAGAAAGC CCGGCGCAAG
GTGGAAATCG TGGTGCCCCA GCGGGGCGAG AAGACCGAGC TTGTGGCCTC GGCTGTGCGC
AATGCCCGTG AAAGCCTCGC TCGCCGGATG TCCGAGAGCG CCACACAGGC CAAACTTTTG
CGCGGCATTG CTGATGCTTT TGGGCTGGAA GCTCCGCCAA ACCGCATCGA GGTTTACGAC
AACTCTCACA TTCAGGGCAC CAACGCCGTC GGTGGCATGA TCGTCATGGG GCCTGAGGGC
TTTATGAAAA ACGCCTATCG TAAGTTCAAC ATCAAGGATG GTGAGGTCAT TGCAGGCGAT
GACTTTGGCA TGATGAAGGC GGTGCTGAAC CGCCGCTTCT CCCGCCTGTT GAAAGAAGAC
CCCGACCGCC AAAAGGGCAT GTGGCCGGAT CTTCTGCTCA TTGACGGCGG TGCGGGGCAG
GTATCGGCCG TGGCCGAGAT CATGGAGGAG CATGGCGTGC AGGACATTCC CATGGTCGGG
GTGGCCAAGG GTGTCGATCG CGACCATGGC AAGGAGGAGT TCTACCGCCC CGGCGAAAAC
GCCTTTGCGC TGCAACGCAA TGATCCTGTG CTTTACTTCA TTCAACGCAT GCGCGACGAG
GCGCACCGGT TTGCCATCGG CACCCACCGG GCCAAGCGGG CAAAATCTCT TGTGGCCAAT
CCATTGGATG ACATTCCCGG CGTCGGCGCG CGTCGCAAGA AGGCACTTCT GACGCATTTT
GGCAGCGCCA AGGCGGTGAG CCGCGCGAAC CTGTCGGATC TCAAGGCGGT GGACGGCGTC
TCAGACGCGC TGGCGGAAAC GATCTACAAC TATTTTCAGG TGCGCTGA
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| Protein sequence | MAQNHMSETM NDISAESPDQ PEPPRTGYGV IQAYLKTLDS SPGVYRMLDH ESRVLYVGKA
RNLRARVSNY TRPGHTQRIE TMISQTSRMM FLTTRTETEA LLLEQNLIKQ LKPKYNVLLR
DDKSFPYIMV SKNHAFPQLK KHRGARKGKA SFFGPFASAG AVNRTLNQLQ KAFLLRNCTD
TMFENRTRPC LQYQIKRCSG PCVGKISQAD YADSVRDAER FLAGRSTKIQ EELGAEMQAA
SEAMEYERAA ALRDRIKALT QVQSAQGINP RGVSEADIIG LHLENGLACV QVFFIRANQN
WGNQDFYPRV AEDMSAAEVM EAFIGQFYDN KDVPRQLILS DDIENADLMA VALSEKARRK
VEIVVPQRGE KTELVASAVR NARESLARRM SESATQAKLL RGIADAFGLE APPNRIEVYD
NSHIQGTNAV GGMIVMGPEG FMKNAYRKFN IKDGEVIAGD DFGMMKAVLN RRFSRLLKED
PDRQKGMWPD LLLIDGGAGQ VSAVAEIMEE HGVQDIPMVG VAKGVDRDHG KEEFYRPGEN
AFALQRNDPV LYFIQRMRDE AHRFAIGTHR AKRAKSLVAN PLDDIPGVGA RRKKALLTHF
GSAKAVSRAN LSDLKAVDGV SDALAETIYN YFQVR
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