Gene TM1040_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2498 
Symbol 
ID4076863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2640025 
End bp2640492 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content59% 
IMG OID638007822 
Productheat shock protein Hsp20 
Protein accessionYP_614492 
Protein GI99082338 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.566627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGT TTGATTTTGC TCCGCTGCAC CGTGCAACTG TCGGCTTCGA CCAGATTGCC 
GATTTAATGG ACCGGGTGAT GAGCTCGGAT CTCCAGCAGC CAAGCTACCC CCCATACAAC
ATTGAAAAAA CCTCGGACGA TGCCTACCGC ATCTCGATCG CTGTCGCGGG CTTTTCCGAA
GACGAGTTGA ACGTCGAGGT AAAAGAGCAC GCCCTGGTCG TGTCCGCGCG CAAGTCCGAA
GAGAACGGCG AGCGCACCTA CCTGCATCGC GGGATTGCAA CCCGAGCCTT TGAACGCCGT
TTCACCCTTG CAGATCATGT GCGGGTGCAG GGCGCCAGCC ACGGCGACGG CATGCTCCAT
ATCGATCTCG TGCGAGAAGT GCCTGAGGCG CTGAAGCCGC GCCGGATCGA GATTTCCTCC
GCTGCGGCGT CCAAGCCCAA GGAAATTTCG GGCTCGACCG TGAACTGA
 
Protein sequence
MRTFDFAPLH RATVGFDQIA DLMDRVMSSD LQQPSYPPYN IEKTSDDAYR ISIAVAGFSE 
DELNVEVKEH ALVVSARKSE ENGERTYLHR GIATRAFERR FTLADHVRVQ GASHGDGMLH
IDLVREVPEA LKPRRIEISS AAASKPKEIS GSTVN