| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2482 |
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| Symbol | smpB |
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| ID | 4076847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2621561 |
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| End bp | 2622037 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007806 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_614476 |
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| Protein GI | 99082322 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.082086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC AAAAGACAGA CCCGAATTAC AAAGTCATAG CTGAAAACCG GCGCGCGCGG
TTTGACTATG CGATCGAGCA GGATCTCGAA TGCGGCATCA TGCTTGAAGG GTCCGAGGTG
AAATCCCTGC GCGCGGGTGG CTCCAACATC GCGGAGTCCT ATGCTGCGGT GGAGGAAGGC
GAGCTGTGGC TGGTCAATTC CTATATCGCG CCCTACGAGC AGGCGAAGGT TTTCAAGCAC
GAAGAGCGCC GCCGCCGGAA GCTTTTGGTG TCGCGCAAGG AAATGGCGGA TCTGTGGAAC
GCAACCCAGC GCAAGGGGAT GACTCTTGTG CCGCTGGTTC TCTATTTCAA CCATCGTGGC
ATGGCGAAGA TCAAGATCGG CATCGCGAAG GGTAAGAAGA ACCACGACAA GCGCGAAGCC
CAGGCCAAAC GCGATTGGTC ACGCCAGAAA CAACGCCTTC TCAAGGATCA CGGCTAA
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| Protein sequence | MAKQKTDPNY KVIAENRRAR FDYAIEQDLE CGIMLEGSEV KSLRAGGSNI AESYAAVEEG
ELWLVNSYIA PYEQAKVFKH EERRRRKLLV SRKEMADLWN ATQRKGMTLV PLVLYFNHRG
MAKIKIGIAK GKKNHDKREA QAKRDWSRQK QRLLKDHG
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