| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2412 |
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| Symbol | |
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| ID | 4076738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2551834 |
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| End bp | 2552994 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007734 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_614406 |
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| Protein GI | 99082252 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.462091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTATG CCTATCTGCG AGGACTTCGG AATGCACGGC TACAGAACAA CAACGACGAA
ACATCGACAG TTTTTCGTTC CTGTTCCGTG CCAACGTTCC AAAAGATGCG GAGCGCGTAC
GGGAGGCGAG TGGTGAAGGA TGTTTTTGCC CCCAATGGTG GGGTCTTTAT CAACCGGCTG
GTCGAATACG TAACCGGTCA GGGGCATGAC TTCGAGAACA TGCTAGCCCA AAAGCTCGCA
ATCTCTGAAC CTCTGAGCTC GAGCGCTCAG GTCCTCCCTG TTTATGAACA CTCCTTGGTC
TTCGGGCTGG CGGAGAGGGT GTGCAACGAC ACGTCGATTG GCTACGCTTT GGCCTATCAA
TGCACGCTGC GTGATGCAGG ACTTGTGGGC TATGCGGTAA GCGCCTCGGA GACTGCTGGT
GAGGCGCTGT ACACTCTAAG CCGCCTCAGC AACGTCTTTG AGGTCGTCTC TGCCTCCGCC
AGTGGCGGGC TTGTGGATCT GCGCTGGGAC TTTGGATCGC AGGGTAAACT GGATCTGCGT
CACTGGAGCG AGTTCATCGC TACCCTCTTG GTTCGTAGCT TAAAAACCCT CTGCACCGGT
GCGGTTGCGC CGGTAGGGGT TGAGTTCACC CATACTGCGC CATCCTCCTC AGAGCAGGCG
GTCCTGGCCT TTGGTGTCAA ACCAACCTAC CGCGGGCGCC TGAATCGTCT GACCTTTCGC
GAACAGGATC TGCGCCAGCC CTTGCGTAGT GCAGATGCAG GCTTGCTGAG GCTCCTGCTG
GAGCATGCGG AGCTGTTGCG CCGCCGCCCG GACAGGAACA GCAATGATCT GTCGATCACC
GTTGAGCGTC TGATTATGGA CGGCATGTCA GAAGGAGATG CCAGCCTGGC GCAAGTGGCA
GAGTCGCTGG ATATGAGCCA GCGCACGCTG TCCCGGAAGC TTGCCAGCGA GGGGACGAGC
TTCTTTGCGA TCCTGGAGGG GGTGCGAAAA TCGCTGGCCC TGCGCTACCT CCAGCAAAAC
GAGAAATCCC TCTCAGAGAT CTCCTTTGCT TTGGGCTACT CCAGTCTGAG CAGTTTCAAT
GACGCCTTCA GGCGTTGGTA CGACCAAAGT CCCGGAAGCT ATCGGAGCGA TGCGCTCAAA
GAGGCTGCTG TGAAGTCCTG A
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| Protein sequence | MGYAYLRGLR NARLQNNNDE TSTVFRSCSV PTFQKMRSAY GRRVVKDVFA PNGGVFINRL
VEYVTGQGHD FENMLAQKLA ISEPLSSSAQ VLPVYEHSLV FGLAERVCND TSIGYALAYQ
CTLRDAGLVG YAVSASETAG EALYTLSRLS NVFEVVSASA SGGLVDLRWD FGSQGKLDLR
HWSEFIATLL VRSLKTLCTG AVAPVGVEFT HTAPSSSEQA VLAFGVKPTY RGRLNRLTFR
EQDLRQPLRS ADAGLLRLLL EHAELLRRRP DRNSNDLSIT VERLIMDGMS EGDASLAQVA
ESLDMSQRTL SRKLASEGTS FFAILEGVRK SLALRYLQQN EKSLSEISFA LGYSSLSSFN
DAFRRWYDQS PGSYRSDALK EAAVKS
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