| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2363 |
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| Symbol | |
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| ID | 4076482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2485299 |
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| End bp | 2486150 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007685 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_614357 |
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| Protein GI | 99082203 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.574477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTC TGCGGCAGAT CTTGTTGGCG TCGGCGTTGG CAGTTGCCAG CGCCCTCCCA
ACCATGGCGC AGGAGCGTGA ACAGACCTTG GCGGACATTC GCCAAGAGCT GACGGTCCTG
CATGTGGAAG TTCAGCGCCT CAATCGGGAA CTGTCGACCA CGGGGGCCCC TTCGGCGTCG
CTGGCGGGAT CTTCGGTGCT CGACCGGGTC ACCGCAATTG AGACCGAGCT GCAAAAGCTC
ACCGCCAAGA CAGAGCAACT GCAGTTTCGC ATTCAGAGCA TTGTGAAGGA TGGTACCAAC
CGGATCGGTG ATTTGGAATT CAGGCTCGTT GAGCTGGAAG GCGGCGACCT CTCCACGCTG
GGCGAGACCA CGACGCTGGG CGGCGACATC GAAGGCGAAA CAGAGCTGGG GCAGACCACG
GTGCCTGGCA CCGATGGGGA GAGCACGGTG GTTGGCGGAG GCGAGCTCGC CGTAGGCGAG
GAAGCCGACT ACAAGCTGGC AATGAGCGAT CTTGAGGCTG AGAACTATCA GGCAGCTGCG
GACCGCTTTG CGACCTTCAA AGAGGCCTAT CCCGGCAGTC CGCTGACGGC TCAGGTGGAT
TTCGGCCGCG GCAAGGCGTT GGACGGTCTG GGCGACACCC GTGAAGCGGC GCGGGCCTAT
CTGGCGGCGT TTACCGGTGA TACGGCGGGC GCCATCGCAC CCGAAGCGCT GTTTGAACTG
GGCGCGGCAC TTGGGCGACT GGGGCAGCTC GATCAGGCTT GTATCACGCT GGCCGAGGTC
GCCGTGCGTT TCCCCAATGA TCCCGCCGTG ACCGCAGCCG AAGCGGAGCG GTCCAAACTG
GCGTGCTCCT GA
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| Protein sequence | MSGLRQILLA SALAVASALP TMAQEREQTL ADIRQELTVL HVEVQRLNRE LSTTGAPSAS
LAGSSVLDRV TAIETELQKL TAKTEQLQFR IQSIVKDGTN RIGDLEFRLV ELEGGDLSTL
GETTTLGGDI EGETELGQTT VPGTDGESTV VGGGELAVGE EADYKLAMSD LEAENYQAAA
DRFATFKEAY PGSPLTAQVD FGRGKALDGL GDTREAARAY LAAFTGDTAG AIAPEALFEL
GAALGRLGQL DQACITLAEV AVRFPNDPAV TAAEAERSKL ACS
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