Gene TM1040_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2362 
Symbol 
ID4076481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2484016 
End bp2485308 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content63% 
IMG OID638007684 
ProducttRNA(Ile)-lysidine synthetase-like 
Protein accessionYP_614356 
Protein GI99082202 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.54755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.628106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCTGA CACCGACAGA AGAGGCGCTG ACCTCTGCGA TCCGCGCCCG TATCGGTCCC 
TTGCCCGAAA AACTTGGCGT CGCTGTCTCC GGAGGCAGCG ATTCCGTTGC GTTGATGCAT
GTGCTTGCGA CCATGGCTCG TGCAGAAGAC ACAGCGCTGG CGGTGGCCAC GGTGGATCAC
GGGTTGCGCC CCGAATCACG GCGTGAAGCC GAGTTTGTGG CGCAGCAAGC ACATGACCTT
GGGCTCTCGC ATCAGACCCT GACATGGCAA CATCCCGCTG ACAGCGGAAA CCTTCAGGCA
GAGGCCCGCG CTGCGCGCTA TCGCTTGCTG GGAGACTGGG CACGGACGCA GGGCCTCGGC
GCGGTGGCGG TCGGGCATAC CGCGGACGAT CAGGCTGAAA CCGTTCTGAT GCGGTTGCGA
CGGGCCTCTG GGGTGGCCGG GCTCTGCGGT ATGCCGACAT GTCACCACCG CGACGGGATC
GATGTCCTGC GTCCGATGCT GGATCTGCGC CGTAGCGATC TGCGCGCTTA TCTTACGGCG
CGCGATGTGG CTTGGATCGA GGATCCCTCA AACCTTGATA TGAAGTTCGA GCGTGTGCGT
ATACGCGATG CGCTCAACGC GCTGGAGCCT TTGGGTCTGA CCGTGGACGC GCTGACAGCG
GTGGCTGACA ATATGCGCAT GGCCAATAGG GCATTGGACA GTGCGACACG CACCGCTGCC
GCGTCGATCG GGCAGATCCG TCTTGGCATG GTGGTCCTTG ATTGTGCAGG GTTTAATCGG
CTTGAGACCG AAATCGCGCG TCGTCTTCTG GTGTCGGCAC TTCTGCACAC AAACGGCGCC
GCATACCCGC CGCGCCGGGC GCCTGTTCTC GATGCATTGA AGGCGCTGAA AGAGGGGCGG
GGCGCAACCT TGCAGGGCTG CCATATCCTC GTGCGGGGCG GTGCGATCTG GGTTGGGCGC
GAATATGCCT CCGTGCAACA CTCCGCATGC GCCCTCTTGC CCGGTGAGGG TGGTGTCGCA
ACGATGGATG CAACTTGGGA CGCGGCATGG CACATCAAGG CGCCTGCCGG ATGGAGCCGA
CGCGTCGAGA TTCGCGCGCT CGGAGCCGAA GGCCTTGCCG AAATCCCCGA TTGGCGCAGT
CACGACGCCC CGCGCGCCCT TTTGAAATCT CTTCCGGGGG TCTGGTGTGA TGGCCAGTTG
ATCGCCGCGC CGCTGCTTCA GGAGCGCTCT GGCTGGACGA TTGCGGCAAT TCGACAGCCT
GAGACATGGG CACTGTCTGC TTTATCGCAT TGA
 
Protein sequence
MLLTPTEEAL TSAIRARIGP LPEKLGVAVS GGSDSVALMH VLATMARAED TALAVATVDH 
GLRPESRREA EFVAQQAHDL GLSHQTLTWQ HPADSGNLQA EARAARYRLL GDWARTQGLG
AVAVGHTADD QAETVLMRLR RASGVAGLCG MPTCHHRDGI DVLRPMLDLR RSDLRAYLTA
RDVAWIEDPS NLDMKFERVR IRDALNALEP LGLTVDALTA VADNMRMANR ALDSATRTAA
ASIGQIRLGM VVLDCAGFNR LETEIARRLL VSALLHTNGA AYPPRRAPVL DALKALKEGR
GATLQGCHIL VRGGAIWVGR EYASVQHSAC ALLPGEGGVA TMDATWDAAW HIKAPAGWSR
RVEIRALGAE GLAEIPDWRS HDAPRALLKS LPGVWCDGQL IAAPLLQERS GWTIAAIRQP
ETWALSALSH