Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2362 |
Symbol | |
ID | 4076481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2484016 |
End bp | 2485308 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007684 |
Product | tRNA(Ile)-lysidine synthetase-like |
Protein accession | YP_614356 |
Protein GI | 99082202 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.54755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.628106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCCTGA CACCGACAGA AGAGGCGCTG ACCTCTGCGA TCCGCGCCCG TATCGGTCCC TTGCCCGAAA AACTTGGCGT CGCTGTCTCC GGAGGCAGCG ATTCCGTTGC GTTGATGCAT GTGCTTGCGA CCATGGCTCG TGCAGAAGAC ACAGCGCTGG CGGTGGCCAC GGTGGATCAC GGGTTGCGCC CCGAATCACG GCGTGAAGCC GAGTTTGTGG CGCAGCAAGC ACATGACCTT GGGCTCTCGC ATCAGACCCT GACATGGCAA CATCCCGCTG ACAGCGGAAA CCTTCAGGCA GAGGCCCGCG CTGCGCGCTA TCGCTTGCTG GGAGACTGGG CACGGACGCA GGGCCTCGGC GCGGTGGCGG TCGGGCATAC CGCGGACGAT CAGGCTGAAA CCGTTCTGAT GCGGTTGCGA CGGGCCTCTG GGGTGGCCGG GCTCTGCGGT ATGCCGACAT GTCACCACCG CGACGGGATC GATGTCCTGC GTCCGATGCT GGATCTGCGC CGTAGCGATC TGCGCGCTTA TCTTACGGCG CGCGATGTGG CTTGGATCGA GGATCCCTCA AACCTTGATA TGAAGTTCGA GCGTGTGCGT ATACGCGATG CGCTCAACGC GCTGGAGCCT TTGGGTCTGA CCGTGGACGC GCTGACAGCG GTGGCTGACA ATATGCGCAT GGCCAATAGG GCATTGGACA GTGCGACACG CACCGCTGCC GCGTCGATCG GGCAGATCCG TCTTGGCATG GTGGTCCTTG ATTGTGCAGG GTTTAATCGG CTTGAGACCG AAATCGCGCG TCGTCTTCTG GTGTCGGCAC TTCTGCACAC AAACGGCGCC GCATACCCGC CGCGCCGGGC GCCTGTTCTC GATGCATTGA AGGCGCTGAA AGAGGGGCGG GGCGCAACCT TGCAGGGCTG CCATATCCTC GTGCGGGGCG GTGCGATCTG GGTTGGGCGC GAATATGCCT CCGTGCAACA CTCCGCATGC GCCCTCTTGC CCGGTGAGGG TGGTGTCGCA ACGATGGATG CAACTTGGGA CGCGGCATGG CACATCAAGG CGCCTGCCGG ATGGAGCCGA CGCGTCGAGA TTCGCGCGCT CGGAGCCGAA GGCCTTGCCG AAATCCCCGA TTGGCGCAGT CACGACGCCC CGCGCGCCCT TTTGAAATCT CTTCCGGGGG TCTGGTGTGA TGGCCAGTTG ATCGCCGCGC CGCTGCTTCA GGAGCGCTCT GGCTGGACGA TTGCGGCAAT TCGACAGCCT GAGACATGGG CACTGTCTGC TTTATCGCAT TGA
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Protein sequence | MLLTPTEEAL TSAIRARIGP LPEKLGVAVS GGSDSVALMH VLATMARAED TALAVATVDH GLRPESRREA EFVAQQAHDL GLSHQTLTWQ HPADSGNLQA EARAARYRLL GDWARTQGLG AVAVGHTADD QAETVLMRLR RASGVAGLCG MPTCHHRDGI DVLRPMLDLR RSDLRAYLTA RDVAWIEDPS NLDMKFERVR IRDALNALEP LGLTVDALTA VADNMRMANR ALDSATRTAA ASIGQIRLGM VVLDCAGFNR LETEIARRLL VSALLHTNGA AYPPRRAPVL DALKALKEGR GATLQGCHIL VRGGAIWVGR EYASVQHSAC ALLPGEGGVA TMDATWDAAW HIKAPAGWSR RVEIRALGAE GLAEIPDWRS HDAPRALLKS LPGVWCDGQL IAAPLLQERS GWTIAAIRQP ETWALSALSH
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