| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2359 |
|---|
| Symbol | |
|---|
| ID | 4076478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2480493 |
|---|
| End bp | 2481074 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638007681 |
|---|
| Product | MOSC domain-containing protein |
|---|
| Protein accession | YP_614353 |
|---|
| Protein GI | 99082199 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.155986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.525072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTAT TACGCGAAAC CCAATTCAGC GCAGAGATCA CTTGGTTGGG GATGGTTCCC
GCCGATACAG GTATTCAGGC GCAGCCCCGC ACTGAGTTGG ATCTGCTGTT CAGTGGCGTC
GCAGGCGAGC GGCACGAAGG GGCCCAGCGT CCCTCCTGTG TGCGGGTCAA GAACCTCTAT
GTCCCCGGCA CCGAGATCCG CAATACGCGC CAACTGACGA TTCTCTCCGA AGAGGAACTC
GCGCTGATCG CGGCAGAGAT GGGGCTTGAG GCGCTTGACC CGCGGTATCT CGGCGCAACA
GTCGTGCTGC GCGGTATTCC CGACCTGACC CACCTGCCGC CTGCGTCGCG CCTGCAGGGC
AAAAATGGGG TCACGATCAC CGTCGACATC GAGAATCGTC CCTGCATCCT GCCCGGTCGC
GAGATCGAGA AAGACCACAC AGGCTTTGGC CCGAAATTTA AAACCGCCGC CGAAAATCGC
CGCGGCGTGA CCGCTTGGGT CGAACGCCCC GGTCGGCTCG CTCTTGGTGA TCAGATGCGT
CTTTTTGTGC CCGACCAGCC CGCTTGGGCG GCAGAGCGCT AA
|
|---|
| Protein sequence | MPVLRETQFS AEITWLGMVP ADTGIQAQPR TELDLLFSGV AGERHEGAQR PSCVRVKNLY
VPGTEIRNTR QLTILSEEEL ALIAAEMGLE ALDPRYLGAT VVLRGIPDLT HLPPASRLQG
KNGVTITVDI ENRPCILPGR EIEKDHTGFG PKFKTAAENR RGVTAWVERP GRLALGDQMR
LFVPDQPAWA AER
|
|---|
| |