Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2321 |
Symbol | |
ID | 4078311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2441144 |
End bp | 2442754 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007643 |
Product | sulphate transporter |
Protein accession | YP_614315 |
Protein GI | 99082161 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCG GCGTATTGGG CCTTTTGGCC AAGAATATCT CTCCTCCCAA TCTTTCCATC ATGCAGGATG AGGGTTTTAC GGTGGCGCGT GTGCGCACCG AGCTGTTGTC CGGGCTGACG GTGGCCCTGG CGCTGGTGCC GGAGGCGGTG GCCTTTGCCT TTGTGGCTGG GGTGCATCCT CTGGTGGGGC TCTATGCGGC CTTTCTGGTG GGGCTGATCA CGGCGCTCAT CGGGGGGCGT CCGGGCATGA TTTCGGGGGC GACCGGAGCG CTGGCAGTGG TGATGGTGGC GCTGGTGGCC GAGCACGGGG TGGAGTATCT CTTTGCCACC GTGGTTTTGA TGGGCATCCT GCAGGTCATC GCCGGTGTCA TGCATTGGGG CAAGTTCATC CGACTGGTGC CGCATCCGGT GATGCTTGGC TTTGTGAACG GTCTGGCGAT CGTGATTTTC CTAGCGCAGC TTACGCAGTT CAAGCAACCC GGCACCGGGG GCGAAGAATG GCTTGCCGGG CCGCAGCTTC TGATGATGCT GGGGCTTGTG GTGCTGACCA TGGTGATCAT CTGGGGCATG CCCAAGCTGA CCAAGGTGAT CCCGGCGCCG CTGGCGGGGA TCGGGATTAC AGCGATCATC GTGATCGCCT TTGGTCTTGA TGTGCCGCGC GTGGGCGACA TGGCGTCCAT CGAGGGGGGC TTGCCAAGCT TTCACGTGCC GATGGTGCCG TTCAACATGG AAACGCTGCA GATCATCCTG CCCTATGCGG TCATCCTGGC GGCGATTGGC CTCATCGAGA GTCTTTTGAC CCTGAACCTT GTGGGCGAAA TCACCGGCAA GCGGGGCGGC GCGAGCCAGG AGTGCATCGC GCAGGGGACA TCGAATATTG TTACCGGTTT CTTTGGCGGC ATGGGCGGTT GTGCGATGAT TGGTCAGTCG ATGATCAACG TGAATTCGGG CGGGCGCACG CGGATCGCGG CGATTGCGGC AGCCCTGTTT CTGTTGCTGT TCATCGTGGC GGCCTCTCCG CTGATTGAAC AGATCCCGCT GGCAGCGCTC GTGGGCGTGA TGTTCATGGT GGTGATCGGG ACATTTGCGT GGAACAGCTT CAAGATCATG ACCAAGGTAC CGCTGACGGA TGCCTTTGTG ATCGTGCTGG TGACCGTGGT CACGGTGATG ACCGACCTTG CGATCGCTGT TGTGGTCGGG GTCATCGTGT CGGCGCTGGC CTACGCGTGG AACAACGCGC GGCGCATTCA CGCGATCACC CGCGACAGCG TGAGCGAGAA AGGCGCCAAG GTCTATGAGA TCCAGGGGCC GCTGTTCTTT GGCTCGACCG ACGGGTTCAT CGAGCTCTTT GACGTAGAAA ACGATCCCGA CGTGGTGATC GTGGACTTTG CGGCCTCGCG GGTTGTGGAT CAGTCGGCGC TGCAGGCCAT CGAGGCTGTG GCCGGAAAAT ACGAGGCCGC TGGCAAGGCG CTGCAACTGC GTCACCTGAG CCGCGATTGT CACGAGCTCC TGTCCAAGGC CGGGCATCTG ATGGTCGATA GCGACGATGA TCCGGAATAT GGCCTCGCGG TGGACTACTC GGTCAAAACC GGGGTTCTGG GCGGTCACTA A
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Protein sequence | MTRGVLGLLA KNISPPNLSI MQDEGFTVAR VRTELLSGLT VALALVPEAV AFAFVAGVHP LVGLYAAFLV GLITALIGGR PGMISGATGA LAVVMVALVA EHGVEYLFAT VVLMGILQVI AGVMHWGKFI RLVPHPVMLG FVNGLAIVIF LAQLTQFKQP GTGGEEWLAG PQLLMMLGLV VLTMVIIWGM PKLTKVIPAP LAGIGITAII VIAFGLDVPR VGDMASIEGG LPSFHVPMVP FNMETLQIIL PYAVILAAIG LIESLLTLNL VGEITGKRGG ASQECIAQGT SNIVTGFFGG MGGCAMIGQS MINVNSGGRT RIAAIAAALF LLLFIVAASP LIEQIPLAAL VGVMFMVVIG TFAWNSFKIM TKVPLTDAFV IVLVTVVTVM TDLAIAVVVG VIVSALAYAW NNARRIHAIT RDSVSEKGAK VYEIQGPLFF GSTDGFIELF DVENDPDVVI VDFAASRVVD QSALQAIEAV AGKYEAAGKA LQLRHLSRDC HELLSKAGHL MVDSDDDPEY GLAVDYSVKT GVLGGH
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