| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2297 |
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| Symbol | |
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| ID | 4078481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2416579 |
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| End bp | 2417223 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007619 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_614291 |
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| Protein GI | 99082137 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAAGC AATCCTTCTC TCACGTCGAA CACTGGGTGT TCGATCTCGA CAACACGCTC
TATCACCCTT CTGCCCGTCT GTTTGATCAG ATCGAGGCCA AGATGATCAC CTATGTGATG
GAGACCCTCC AGATCGATCA CGGGGCCGCC GACAAGCTGC GTGGCGACTA TTGGCGCAAT
CACGGCACCA CGCTGGCGGG GCTGATGAAG GAACATGACA TCGATCCCGA CCCGTTTCTG
GTCGCGGTGC ATGACATCTC GCTCGACCAT CTGGAGCCGG ACCAGACGCT CGCAGGTCAC
ATCAAGGCAC TCCCGGGGCG CAAGATCGTC TACACCAACG GCTCTGCACC CTATGCAGAG
CGCGTGCTGG CCGCGCGGGG GCTGACGGGG CTGTTTGACG GGATATTTGG CGTCGAACAT
GCAGATTATC GCCCCAAACC CGAGCGCAGC GCCTTTGAAC GGGTGTTTGA ACGGGCCGGT
GTCGACACCA CACGGGCGGC GATGTTCGAG GATGATCCAC GCAACCTCAA CGCGCCACAC
GCCATGGGGA TGCGCACGGT GCATGTGGCG CCCGAGGCCC ACCCGGGCGA TCACATCCAC
CATCACACCG AAGATCTGAC CGCTTTTCTC GGTCAACTGC GGTAG
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| Protein sequence | MVKQSFSHVE HWVFDLDNTL YHPSARLFDQ IEAKMITYVM ETLQIDHGAA DKLRGDYWRN
HGTTLAGLMK EHDIDPDPFL VAVHDISLDH LEPDQTLAGH IKALPGRKIV YTNGSAPYAE
RVLAARGLTG LFDGIFGVEH ADYRPKPERS AFERVFERAG VDTTRAAMFE DDPRNLNAPH
AMGMRTVHVA PEAHPGDHIH HHTEDLTAFL GQLR
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