| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2270 |
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| Symbol | |
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| ID | 4078454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2384585 |
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| End bp | 2385289 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007592 |
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| Product | ABC transporter related |
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| Protein accession | YP_614264 |
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| Protein GI | 99082110 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00112546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.490957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG ATGCCCGCCC CATTCTTACG CTTCAAGATG TGCATTTGTC GTTGAATGGC
AATACCGGCC CGGTGCGGAT CCTCGAAGAG ATCTCGCTCG AGGTCCAATC CGGCGAGACG
CTGGCCCTTG TTGGCCCATC GGGGTCGGGG AAATCATCGC TGCTGATGGT GATGGGCGGG
CTGGAACAGG CCACCGGCGG CCAAGTGCGC GCCATGGGAG AGGATCTGAC CCGGCTGGAC
GAGGACGCGC TGGCCCGGTT TCGCCGCGCC CACATGGGGG TGGTGTTTCA GAGCTTTCAC
CTGATCCCGA CCATGACGGC GCTGGAAAAT GTAGCCACGC CTCTGGAGCT GGCCGGGGCG
CGCGACGCCT TTGACCGCGC CCGCGATGAA CTGGAAGCCG TGGGTCTGGG GCATCGTTGC
GATCACATGC CTGCACAGAT GTCGGGCGGT GAGCAGCAGC GTGTGGCTTT GGCCCGCGCC
GTCGTGACGC GCCCCGAGAT CCTTTTGGCG GATGAGCCCA CGGGCAATCT CGATCAGGCA
AACGGCGCAC AGGTGATGGA TTTGCTCTTT GATCTGCGCG ACCGGCATGG CTCGACACTG
GTGATGGTGA CTCATGCGCC CGAACTGGCC GAGCGCTGCG ATCGCACCAT CCGCCTGCGC
GACGGTCGCA TCCTGACCGA CGCCCAGCGC GAGGCCGCGG AATGA
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| Protein sequence | MSTDARPILT LQDVHLSLNG NTGPVRILEE ISLEVQSGET LALVGPSGSG KSSLLMVMGG
LEQATGGQVR AMGEDLTRLD EDALARFRRA HMGVVFQSFH LIPTMTALEN VATPLELAGA
RDAFDRARDE LEAVGLGHRC DHMPAQMSGG EQQRVALARA VVTRPEILLA DEPTGNLDQA
NGAQVMDLLF DLRDRHGSTL VMVTHAPELA ERCDRTIRLR DGRILTDAQR EAAE
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