| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2251 |
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| Symbol | |
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| ID | 4077318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2365793 |
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| End bp | 2366992 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007573 |
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| Product | putative ABC transporter solute-binding protein |
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| Protein accession | YP_614245 |
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| Protein GI | 99082091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.11793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TCTTGTCCCT TGCCCTCGCC CTTGCGCCGC TTTCGGCCTG GGCCACACCC
GATCCGGCGG ATTGGCCCGC CGTGGTGGAA GATGCAAAAG GGCAGACGGT GCATTGGCAT
GCCTGGGGCG GCTCCACCGC GACCAATGAC TTTATCGCCT GGGTGGGCGA ACGTCTTGAG
GACGACTACG ACATCACCCT CAACCATGTG AAACTCGAAA GCACCGCCGA TGCGGTCACG
CGGGTGCTGA CCGAGAAATC CGCGGGCCAG GATGACGATG GCGCGGTGGA TCTCATCTGG
ATCAACGGGG CGAATTTCGC CGCGATGAAG GACGCCGATC TGTTGTTTGG CCCCTTTGCC
GAGGCCCTGC CCAACTGGCA GCTGGCCGAC ACCGAAAACA AGACGCTGCA GCATGATTTC
ACCGTCCCCA CCGAAGGCTA CGAGTCCCCA TGGGCGATGG CGCAGGTGGT CTTCATGCAT
GACACCGCCG ACCTGCCCGA GCGGCTTGGC TCGATGGAGG CGCTGTTGGA CTGGGCGCGC
GAACATCCCG GTCGCTTCAC CTATCCGCAG CCCCCGGATT TCCTCGGCAC CACCTTTCTG
AAACAGGCAC TGGTTGACCT GAGCGACAAT GCCGATGCGC TGTCCAAGCC CGTGAATGAA
GACAACTACC AAGAGGTCAC TGCCCCGCTC TGGGCCTTTC TCGAAGAGCT GACGCCGCTG
TTGTGGCGCG AGGGGCGCGC CTATCCCGCC ACTGGCCCGC GTCAGCTGCA GTTGATGAAT
GACGACGAGA TTGATCTCGC GATCTCTTTC AGCCCCGGCG AAGCGAGCAC CGCCATCGCC
AACTACCAGC TGCCCGAAAG CGTGCGCACC TTCGTGCTCG ACAAGGGCAC GATCGGCAAT
GCATCCTTTG TGGCGATCCC CTATAATTCC GGCTCCAAGG CGGCCTCCAT GGTGGTTGCG
AACTTCCTGA TGTCGCCCGA GGCCCAACTG CGCGCCCAGG ACCCGGACGT TCTGGGCTAT
GGCACCGTGC TCGATCTCAA TGCGCTCTCG GTGCAGGACC GCGCGGCCTT CCGCACGCTC
GATCTCGGGA TCGCCACCCT GACCCCCGAG GAACTCGGCC CTGTGCAGCC TGAACCGCAC
CCCAGCTGGA TGACCCGCAT CTCCGAGGAC TGGGTGGCGC GCTACGGCGT TGGCAACTGA
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| Protein sequence | MKRILSLALA LAPLSAWATP DPADWPAVVE DAKGQTVHWH AWGGSTATND FIAWVGERLE
DDYDITLNHV KLESTADAVT RVLTEKSAGQ DDDGAVDLIW INGANFAAMK DADLLFGPFA
EALPNWQLAD TENKTLQHDF TVPTEGYESP WAMAQVVFMH DTADLPERLG SMEALLDWAR
EHPGRFTYPQ PPDFLGTTFL KQALVDLSDN ADALSKPVNE DNYQEVTAPL WAFLEELTPL
LWREGRAYPA TGPRQLQLMN DDEIDLAISF SPGEASTAIA NYQLPESVRT FVLDKGTIGN
ASFVAIPYNS GSKAASMVVA NFLMSPEAQL RAQDPDVLGY GTVLDLNALS VQDRAAFRTL
DLGIATLTPE ELGPVQPEPH PSWMTRISED WVARYGVGN
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