| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2246 |
|---|
| Symbol | |
|---|
| ID | 4077313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2360446 |
|---|
| End bp | 2360919 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638007568 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614240 |
|---|
| Protein GI | 99082086 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3558] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.123131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCA CAGCCCGCCC GCCGCTGCCG CCCTTCACCC GAGAGAGCGC CATTGAAAAA
ATCCGTCTGG CCGAAGATGG CTGGAACAGC CGCGACGCGG CCAAGGTCAG CTTGGCCTAT
ACGCCTGACA GCCGCTGGCG CAACCGGGCA GAGTTTCCCG TTGGGCGCAC CGAAATCGAA
GCCTTCCTGA CCCGCAAATG GGCGCGCGAG CTGGAATATC GGCTCATCAA GGAGCTCTGG
GCCTTTGACG GCAATCGCAT CGCTGTGCGC TACGCCTATG AATATCGCGA CGACAGCGGC
CACTGGTTCC GCGCCTATGG CAATGAAAAC TGGCAGTTTG ATGAGAACGG CCTGATGGAA
GAGCGCCACG CCTCCATCAA TGAGCACCCC ATTTCTGAGG CGGATCGCAA GTTCCACTGG
CCGCTTGGGC GTCGTCCTGA CGACCATCCG GGCCTCAGCG ACCTTGGCCT CTGA
|
|---|
| Protein sequence | MTSTARPPLP PFTRESAIEK IRLAEDGWNS RDAAKVSLAY TPDSRWRNRA EFPVGRTEIE
AFLTRKWARE LEYRLIKELW AFDGNRIAVR YAYEYRDDSG HWFRAYGNEN WQFDENGLME
ERHASINEHP ISEADRKFHW PLGRRPDDHP GLSDLGL
|
|---|
| |