| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2167 |
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| Symbol | |
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| ID | 4076766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2277923 |
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| End bp | 2279320 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007489 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_614161 |
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| Protein GI | 99082007 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.786725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCG ATTTGCCCGC CTTTATGCCG GATCGGCGTT CTGATGTGCC GATCTTTGAG
CAGATCTGCA CGGCCTTGCG ATCTCGAATT CGCTCTGGGG CTCTTGCCAC CGGGGCGCGG
CTCCCGGCAA CGCGGGCGCT TGCAGGGGAT CTGGGGGTGG CGCGTGCGAC GGTCGTGACG
GCCTATGAGC AGCTGGTGGC CGAGGGCTAT CTCATGGCGC GGCGCGGATC GGGTTATACC
GTCTGTGCCA TGGGCGAGGT GGAGCTTCCG GCGAAAGGGA CGCCCACGCC ACCTGCGGAC
CTCAGCGAGC GGGGAGACCT GCTCTTGGAG GCTGGCCAGC CGGACATGCG TCTCTTTCCG
CACCGCGCCT GGGCAAAAGC CGTTGCTCGC CTCTGCCGCA CACGTCCAGA AGATATGTTG
ATGGGCTGCG GGCGCTTTGG TCATCCGGAC CTGCGCCAGG CCATTGCCGC CCATGTGAAC
GATTGGCGCG GGATCGCCGC GCGGCCGGAT CAGGTGCTGG TCACCTCTGG CGCGACCGAG
GCGTTGGATG TTTGTCTCGC GGCGCTGGCC TCGAGCACCG GAGCGGTTGG GGTGGAGGAT
CCCGGCTATC CCCCGATCCG ACGGTTTGCG CAGGCGCAGG GGCGTCGCAT CCGAGACTTG
GCGCTCGATT CCCAAGGGGC CGAAGTCCCT ACAACTGGCG ATGGCACCGA TGTGGTGGTT
CTGACGCCGT CGCATCAATA CCCGCTTGGT GGCGCGATGA GTGCGGGCCG GCGACAAGAG
TTTGTGCGCT GGGCGGCGCA GTCACAGGGC TGGATCATCG AGGACGATTA CGATTCGGAA
TTTCGCTATG CGGGCCGACC GATTCCCGCG CTGGCAGGTG TCGACGGGCA GGGGCGGACA
GTCTACATCG GCAGCTTCTC CAAGATTTTC TCGAACAGCT TGCGGATGGG GTACATCGTG
GCCCCCGAGG CGCTGGTGGA GCGCCTCGTG CGGGCGATGC GTCGCAAGGG TGCGCGTGCC
AGTGCCATGC CCCAAGCGGC TCTGGCGGAG TTTATGCAGC ACGGAGAGTT CTACCGGCAC
CTGCGCCGGG TGCGCCGAAT CTATGCGGAA CGGCACCGGA CCCTGATCGC GCGGTTGCGC
TCGGATTTCT CTGATGTGGG CCATGTGGAG GATTATCAAG CTGGCATGCA GGTCGTGCTG
CATCTGCGTC CCGAAATTTG CGATCAGACC GTGACAACAG CCGCACGCGC AGCCGGTGTG
GGTGCGGAGG CGCTCTCAAG CTACAGCCGC CGCGCGGGCG CCTTCAATGG GGTGGTTCTG
GGCGCCTGCC TCAATGATCT TGATGAGCAG GCAGAAGCCC TGTCGCGCCT GCGCGCGACG
ATTTCCTCAA CAGGATAA
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| Protein sequence | MPSDLPAFMP DRRSDVPIFE QICTALRSRI RSGALATGAR LPATRALAGD LGVARATVVT
AYEQLVAEGY LMARRGSGYT VCAMGEVELP AKGTPTPPAD LSERGDLLLE AGQPDMRLFP
HRAWAKAVAR LCRTRPEDML MGCGRFGHPD LRQAIAAHVN DWRGIAARPD QVLVTSGATE
ALDVCLAALA SSTGAVGVED PGYPPIRRFA QAQGRRIRDL ALDSQGAEVP TTGDGTDVVV
LTPSHQYPLG GAMSAGRRQE FVRWAAQSQG WIIEDDYDSE FRYAGRPIPA LAGVDGQGRT
VYIGSFSKIF SNSLRMGYIV APEALVERLV RAMRRKGARA SAMPQAALAE FMQHGEFYRH
LRRVRRIYAE RHRTLIARLR SDFSDVGHVE DYQAGMQVVL HLRPEICDQT VTTAARAAGV
GAEALSSYSR RAGAFNGVVL GACLNDLDEQ AEALSRLRAT ISSTG
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