Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2137 |
Symbol | |
ID | 4076451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2243348 |
End bp | 2243776 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007457 |
Product | hypothetical protein |
Protein accession | YP_614131 |
Protein GI | 99081977 |
COG category | [S] Function unknown |
COG ID | [COG0432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.435583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.930073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA TCCAACAGCG CACCTTTACG CTCTCTACCC ACGGCCAGGG TCTCTACGAG ATCACCGATG AGATCCGCAG CTTTGTCCGC TCAAGCGGTG CTGTTCAGGC GCTGCTCACT CTCTATGTGC GCCATACCTC TTGCTCGCTC CTCATCCAAG AGAACGCAGA CCCGGAGGTG CAGGGGGATC TCAAGGCCTA TTTTGCGCGC TTGGTGCCCC CGACGACCGA TCCGCAGATG TCCTACCTGC GCCATACCTA TGAAGGCCCC GACGACATGC CTGCGCATAT CAAGGCGGCG ATGATGCCGG TGAGTCTCTC GATCCCCGTT TCGAGCGCCG AGATGGTCTT GGGCACATGG CAGGGGATTT ATCTTTTTGA GCACCGTGAC GCTCCACATC AGCGCCAAAT CGTTGCTCAT CTGGCCTGA
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Protein sequence | MSNIQQRTFT LSTHGQGLYE ITDEIRSFVR SSGAVQALLT LYVRHTSCSL LIQENADPEV QGDLKAYFAR LVPPTTDPQM SYLRHTYEGP DDMPAHIKAA MMPVSLSIPV SSAEMVLGTW QGIYLFEHRD APHQRQIVAH LA
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