Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2124 |
Symbol | |
ID | 4076438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2228973 |
End bp | 2230523 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007444 |
Product | adenylate/guanylate cyclase |
Protein accession | YP_614118 |
Protein GI | 99081964 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA CCCGCCGCAT CGGCCGTTTT CTGGTCAACC AGCCGCATCT GATCAACTGG GGCATCGGCG CCGCGATTGT TGCCCTGCCC GTGGTGGTCT GGATGGACCT GATGGCGATC ACCGATCAAT CGCTGCGCCG CCAGGGACAG GCTCTGGACG CGGTCTTGGA CACCGTGCGC AGCTATTATG CCCGCAATGT GATTGGCCGC TTGAATCCGG ACGGGTCGAC CTTTGCCACC CACGACTATC ACGACCGTGA CGGGGCCATC CCGATCCCCG CGACCATGGC GATCGAGCTC GGCGATCAGA TCGGCACCCA TGGTCTGAAC GTGCAGTACC GATTTGCCTC GGACTATCCC TTTCATGGCC GCGAGACGAC AGAGCTGACC TGGGCGGAGG ATCACGCGCT GAGCCGGTTT CGCGAGGGGG TGGACGATCA CTACCTGTTC TACCGGGGCG AAGAATCCGG GCTGCTGACA CATGCAGTAA CGATGATCAC TCCTGTGGTG ATGGAAGAGG CCTGCGTTGC CTGCCACAAC AACCACTCCG ACAGCCCCAA AACCGATTGG GCGGTTGGCG ACATTCGCGG CGTGCAGTCC TACAGCATTG TGCAGCCGGT GGCGGTGAGC CTGTTCTCCT TTAGCCACCT GCTGGCCTAT ATGGTGGTCG CTGGCGGCTT TGGTGCGTTT TTTGCACTGC ATCAACTGCG ACTGGCACAG CGGTTTCGCA AGATAAGCGA GGAGCTGTCC TCCAACAATG AATTCCTCGC CGGGATCTCG ATGAAGATCT CGCGCTACCT GTCGCCGCAG GTCTATCGGT CGATCTTCTC CGGCGAAAAG GACGCCTCGA TCTCCACCGA ACGCAAAAAA CTGACGGTGT TCTTTTCCGA CATCAAGGAT TTCACCCAGA CGGCAGAGAC CTTGCAGCCG GAGGAGCTGA CGGCGCTTCT GAACGAGTAT TTCACCGAGA TGTCCGCCAT CGCGGCCAAA CATGGGGCGA CCATCGACAA GTTCATCGGC GATGCCATCG TGGCCTTCTT TGGTGATCCT GAAACGCTGG GCACTGCTGA GGACGCGCGG GCTTGCGTGC GGATGGCGCT GGAGATGCAG GAGCGTTTGA GAGAGCTGGA AAAAGAATGG CGCGCGCGTG GCATCGACAG GCCTTTCCGG GCGCGCATCG GTATCAACAC GGGCTATTGC AACGTCGGCA ACTTCGGTTC GGAAGAACGG ATGGATTACA CCATCATCGG CGCGGAGGCC AATCTGGCCG CCCGCCTGGA GGCGGCAGCG GAACCGGGAG GCATCGTGAT GAGCCATGAG ACTTATGCCC ATGTGCGCGA CTTCGTGGCT GCCACCCCCA TGCCGCCGAT GCAGTTCAAG GGCATCACGC GCGACGTGCA TCCCTATGCC ATCGCGCCGG GGCAATCGGG CAACCTGCCA CCCACCGAGA CCAGCATGGA CGGCAAAAGC CTAACCGTGC ATTTGGAGCG GCTCGACGAC ACCACGCGCG CGCAGCTGGA GGCGATCCTC GGCAAGCCGC TGAAAGGCTG A
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Protein sequence | MKITRRIGRF LVNQPHLINW GIGAAIVALP VVVWMDLMAI TDQSLRRQGQ ALDAVLDTVR SYYARNVIGR LNPDGSTFAT HDYHDRDGAI PIPATMAIEL GDQIGTHGLN VQYRFASDYP FHGRETTELT WAEDHALSRF REGVDDHYLF YRGEESGLLT HAVTMITPVV MEEACVACHN NHSDSPKTDW AVGDIRGVQS YSIVQPVAVS LFSFSHLLAY MVVAGGFGAF FALHQLRLAQ RFRKISEELS SNNEFLAGIS MKISRYLSPQ VYRSIFSGEK DASISTERKK LTVFFSDIKD FTQTAETLQP EELTALLNEY FTEMSAIAAK HGATIDKFIG DAIVAFFGDP ETLGTAEDAR ACVRMALEMQ ERLRELEKEW RARGIDRPFR ARIGINTGYC NVGNFGSEER MDYTIIGAEA NLAARLEAAA EPGGIVMSHE TYAHVRDFVA ATPMPPMQFK GITRDVHPYA IAPGQSGNLP PTETSMDGKS LTVHLERLDD TTRAQLEAIL GKPLKG
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