| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2091 |
|---|
| Symbol | |
|---|
| ID | 4077842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2194905 |
|---|
| End bp | 2195720 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638007410 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_614085 |
|---|
| Protein GI | 99081931 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.700035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC CCGATCAGAC CTCTTTCCCC TCCACCGTGG CAAATGGCCT CGAAATCGTG
ACGGTTCCGT GTCTTGCGGA CAACTATGCC TACCTCGTCA AAGGACCCGA TGGCGTGGCG
CTGATCGATG CGCCCGAGGC CGAGCCGATC CTGACCGCTC TGGAGGCGCG GGACTGGTCG
CTTGGGGTCA TCATGATTAC CCATCACCAC CACGACCATG TGGGCGGTGT CGCCGCACTG
CGTGAAAAAT TCGGCTGCCC GGTCATGGGG CCCAAGGCCG AAGCCGATAA GATCGCAGCC
CAGGGGGTCA CACTGGATAT GGAACTGGAG CCCGGCTTTG AAGGCGGCAC CGGTGCCGGG
CGCTGCCAGG TGCTTGCAGT GCCGGGCCAC ACGCTCGGCC ACATCGCTTT TTATTATCCC
GAGGCGCCGG CCCTGTTCAG CGCCGACAGC CTCATGGTGA TGGGCTGTGG ACGCCTTTTT
GAGGGCACGC CCGCGATGAT GTGGCAGACC ATGACCACGC TTTCTGCGCT CCCTGACGAG
ACGCTGATCT ATTCCGGTCA CGAATACACC GAGAGCAACG CAGGCTTTGC GCTCAGTCTG
GAGCCGGAAA ATGCAGCACT GCAAAAAAGA ATGGATGAAA TCACCAAAAC CCGTCAAAAC
GGCCAACCGA CCGTCCCTGC CCTTCTGTCG CTCGAAAAAC AGACCAACCC GTTCCTGCGA
GCTGGCGATC CAAACCTGAA GAAAACGCTT GGTTTGGAAG GGGTTGAAGA CGCAGAGGTC
TTTGCCCATA TCCGTGTGGC GAAGGATAAG TTCTGA
|
|---|
| Protein sequence | MTMPDQTSFP STVANGLEIV TVPCLADNYA YLVKGPDGVA LIDAPEAEPI LTALEARDWS
LGVIMITHHH HDHVGGVAAL REKFGCPVMG PKAEADKIAA QGVTLDMELE PGFEGGTGAG
RCQVLAVPGH TLGHIAFYYP EAPALFSADS LMVMGCGRLF EGTPAMMWQT MTTLSALPDE
TLIYSGHEYT ESNAGFALSL EPENAALQKR MDEITKTRQN GQPTVPALLS LEKQTNPFLR
AGDPNLKKTL GLEGVEDAEV FAHIRVAKDK F
|
|---|
| |