| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2075 |
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| Symbol | |
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| ID | 4077826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2178130 |
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| End bp | 2179152 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007394 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_614069 |
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| Protein GI | 99081915 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.344649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCT TGAACGAACC CAAGTTGATC TCTGGGAACG CCAATCTTCC GCTCGCTAAA
TCGATCTCGC GCCGCATGAG CATGCACCGT GGTGTCGACC AAGACCTCGT GAACGCCCGT
GTCGAGCGTT TCAACGATGG CGAGATCTTT GTCGAAGTCT ACGAGAACGT GCGCGGCGAG
GATATGTTTA TCATCCAGCC GACCTCGAAC CCGGCCAATG ATAATCTGAT GGAGCTGTTG
ATCATCGCCG ATGCGCTGCG CCGTTCCTCG GCCCAGCGGA TCACCGCAGT GATCCCTTAC
TTCGGCTACG CCCGTCAGGA CCGCCGCACC AAGGCGCGCA CACCGATTTC AGCCAAGATG
GTCGCCAATA TGCTGACCGG CGCGGGCATC GAGCGGGTTC TGACCATGGA TCTGCACGCC
GCTCAGATCC AGGGTTTCTT CGATATTCCG GTGGACAACC TCTATGCCAG CCCGATCTTT
GCGCTGGACG TGAAGGCGCA GTTCAAGGAC CAGATGGACG ACCTGATGGT GGTTTCGCCC
GATGTGGGTG GCGTGGCGCG TGCCCGCGAG CTCGCGAAAC GCATCAACGC CCCCCTGTCG
ATCGTCGACA AGCGCCGCGA AAAGGCGGGC GAGATTGCCG AGATGACCGT CATCGGTGAC
GTCAAAGACA AGATCTGCCT GATCGTCGAT GACATCTGCG ACACCGCCGG CACCCTCTGC
AAGGCCGCGC AGATCCTGCT CGACAATGGC GCCAAGGAAG TCCACGCCTA CATCAGCCAC
GGCGTGATGT CCGGCCCCGC CGTGGAACGT GTGACCAATT CGGTGATGAA ATCGCTGGTG
CTGACGGACT CGATCCAGCC CACTCAGCCG ATCCTCGACG CGCCCAATAT CCGCATCGTG
CCCACCGCGC CGCTCTTTAC GCAGGCGATC CTCAACATCT GGCACGGCAC CTCGGTGTCC
TCGCTGTTTG AGGATAAGAC CCTGATCCCG ATCTACGAGT CGCTCTACAA CAGCCAGAGC
TAA
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| Protein sequence | MPTLNEPKLI SGNANLPLAK SISRRMSMHR GVDQDLVNAR VERFNDGEIF VEVYENVRGE
DMFIIQPTSN PANDNLMELL IIADALRRSS AQRITAVIPY FGYARQDRRT KARTPISAKM
VANMLTGAGI ERVLTMDLHA AQIQGFFDIP VDNLYASPIF ALDVKAQFKD QMDDLMVVSP
DVGGVARARE LAKRINAPLS IVDKRREKAG EIAEMTVIGD VKDKICLIVD DICDTAGTLC
KAAQILLDNG AKEVHAYISH GVMSGPAVER VTNSVMKSLV LTDSIQPTQP ILDAPNIRIV
PTAPLFTQAI LNIWHGTSVS SLFEDKTLIP IYESLYNSQS
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