| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2045 |
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| Symbol | |
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| ID | 4077972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2150883 |
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| End bp | 2151590 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007363 |
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| Product | radical SAM family protein |
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| Protein accession | YP_614039 |
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| Protein GI | 99081885 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0602] Organic radical activating enzymes |
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| TIGRFAM ID | [TIGR03365] 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA GGATCGCAGA GATTTTTGGC CCGACGATTC AGGGCGAGGG GGCCTTGATT
GGCGAACCCA CGGTCTTTGT GCGCGCGGGC GGCTGCGATT ATCGCTGCAG CTGGTGCGAC
AGCCTGCATG CGGTGGACAG CGCGCACCGC CACAGCTGGG CCGCGATGGA GACCGAAGCC
GTCTGGCAGG AGGTGCGCCG CCTCTCGGGA GACCAGCCCC TGACCGTGTC GCTCTCGGGC
GGCAACCCGG CAATCCAGGA CTTCGGCCCG CTCATCGCGC GGGGAAAGGC GGCGGGCTAT
CGGTTTGCCT GCGAAACCCA AGGCTCGATC CCGCGACCGT GGTTCTCCGA TCTTGAGACG
CTGGTGCTTT CGCCCAAACC GCCCTCCAGT GGGGAAGACG TGGATTGGGG CGCCTTTATT
GCCTGTCGCA AAATCGGCGC AGGGGCGCGC CAGCAGGTGA TGAAGATCGT GATCTTTGAT
GAGGCCGACT ATCTCTGGGC GCGGGAGGTT CACCGCCGCC ACAGTGACCT GCCGCTGTAT
CTGCAGCCCG GCAACCCCGA GGTCGACCCC GAAACCCCTG TGGATCTCAA TGCACAGGCG
GAGCGCCTGC GCTGGCTCAC GGAACGGGCC ATGGGCGAGC GGTGGTTTGC GCCTCGTATT
CTGCCGCAAC TGCATGTCCT CATCTGGGGC AACAAACGTG GCGTCTGA
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| Protein sequence | MTLRIAEIFG PTIQGEGALI GEPTVFVRAG GCDYRCSWCD SLHAVDSAHR HSWAAMETEA
VWQEVRRLSG DQPLTVSLSG GNPAIQDFGP LIARGKAAGY RFACETQGSI PRPWFSDLET
LVLSPKPPSS GEDVDWGAFI ACRKIGAGAR QQVMKIVIFD EADYLWAREV HRRHSDLPLY
LQPGNPEVDP ETPVDLNAQA ERLRWLTERA MGERWFAPRI LPQLHVLIWG NKRGV
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