| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2000 |
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| Symbol | |
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| ID | 4077457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2103846 |
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| End bp | 2105762 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007315 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_613994 |
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| Protein GI | 99081840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACCT TGAACCGCAG AAATCTGTTG AAGGGCAGCG TTGCGGCGGC CTGTTTGACG
GTGCCCGCCG TGCGCGCAGT TGGGCAGACG AACTCGCTCT CGGAGATCGG CAAGTTGTTT
GCACCGGTGC CTCGGGCAAA GATCTTCACC GCGCGCGATA TTGTCACGCT TGACCCTTCT
CAACCCTCGG CCGAGGCCAT CGCGGTTGTC GGCACGCGAA TCCTCGCGGT GGGCGCGCTC
AGCGAGGTGC AGGAGATGCT CGGGGATCAA CCCTTTGATG TGGATGACAG TTTCGCCGAC
AAGGTCATCG TGCCAGGGTT TATCAGCCAG CATGATCATC CGGTTCTGGC GGCGCTGTCG
ATGTCGTCCG AGATCCTGTC GATCGAGGAG TGGGCCTTGC CGACGGGCAC CGTGCCTGCG
GTCAAGGACA AGGCGGACTT CATGAAACGC CTCACGGCAG CCGTGGAGGC GCGTACCACC
CCCGGAGAGC CGGTGGTGAC CTGGGGGTAT CATCCCGCCT TTTACGGTCC TTTGACACGC
GCGGATCTCG ACGGGATCAG CACCGAGCGC CCCATTCTGG TGTGGGGTCG CTCCTGCCAC
GAGATGATCC TCAATAGCGC CGCCCTGACG GCCGGTGGGG TGACACAGGC CGCGGTGGAG
GCCTTCGACG CGGCCTCGCA GAAACAGGCC AACCTTGCGG AGGGCCATTT CTGGGAGCAG
GGGCTTTTTG CGGTTCTGCC TCATATTGCG TCTTTGGTGG CCACGCCCGA ACAGCTGCGC
GCTGGGCTCG AACTCAGCCG TGACTTCATG CACAGCAAGG GCATCACCTT TGGCAACGAG
CCCGGCGGCA TTCTTGCAAA ACCCGTGCAG GACGGAGTCA ATGCGGTGTT TTCCAGCCCG
GATATGCCGT TTCGCTGGTC GTTCATGGTC GATGCCAAGA GCATGGTCGC CAGTTACGCC
GATGACGGCG AGGTCATTGC CCGGTCAGAG GCGCTTCAAT CCTGGTACTA CGGGATGACA
AGCCTCGCGC CGCGCCAGGC CAAACTGTTT TCGGATGGGG CGATCTATTC GCAGCTCATG
CAGGTGCGCG CGCCCTATCT CGACGATCAC CACGGCGAGT GGATGATGGA GAAAGAGCTG
TTTGAGCGCG CGTTCAGGGT CTACTGGGAT GCGGGGTATC AGCTGCACAT CCATGTCAAC
GGTGATGCCG GGTTGGATCG TGTGCTGGAG ACGCTCGAGA CCAACATGCG TCGCAATCCG
CGTTTTGATC ACCGTACGGT CATCGTGCAT TTTGCCGTCA GCGCCTTTGA CCAGGTGGAG
CGGATCAAGG CGCTCGGGGC CATCGTGAGC GGCAATCCCT ATTATGTCAC GGCGCTTGCG
GATCAGTATT CCGAAGTGGG TCTTGGCGCC GAGCGGGCAG ACAGCATGGT GCGTCTCGGG
GATCTCTCGC GGGCCGGGGT GCGTTGGTCG CTCCATTCGG ATATGCCGAT GGCGCCAGCT
GACCCGTTGT TCCTGATGTG GTGCGCGGTG AACCGGGTGA CCACGTCGGG CCGGGTGGCG
GCGCCGGAAC AGGCGGTGTC CGCCGAGGAC GCGCTGCGCG GCGTCACCAT CGAAGCGGCC
TATTCGCTGC AGATGGAAGA AGAAATCGGC AGCCTCGTGC GTGGCAAGCG GGCGAATATG
ACGATCCTTG CCGAGAACCC GCTCGAGGTG GATCCCATGG CGATCCGCGA GATCGAGGTC
TGGGGCACGG TGATGGAGGG GCGGGTGCTG CCGGTCCGTT CGAGTGATCG AGCCGCAGCA
ACGCAGCAGG ACGCCTCGGC TGGTCCGCGT GAGGCGGTTT CACCAAATGG AGCGCCAGCC
TTTGACAAAG CTGCCCTTGA GCATGCCCTG AAGGTCACGC ACGCGCATCA TCTCTGA
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| Protein sequence | MRTLNRRNLL KGSVAAACLT VPAVRAVGQT NSLSEIGKLF APVPRAKIFT ARDIVTLDPS
QPSAEAIAVV GTRILAVGAL SEVQEMLGDQ PFDVDDSFAD KVIVPGFISQ HDHPVLAALS
MSSEILSIEE WALPTGTVPA VKDKADFMKR LTAAVEARTT PGEPVVTWGY HPAFYGPLTR
ADLDGISTER PILVWGRSCH EMILNSAALT AGGVTQAAVE AFDAASQKQA NLAEGHFWEQ
GLFAVLPHIA SLVATPEQLR AGLELSRDFM HSKGITFGNE PGGILAKPVQ DGVNAVFSSP
DMPFRWSFMV DAKSMVASYA DDGEVIARSE ALQSWYYGMT SLAPRQAKLF SDGAIYSQLM
QVRAPYLDDH HGEWMMEKEL FERAFRVYWD AGYQLHIHVN GDAGLDRVLE TLETNMRRNP
RFDHRTVIVH FAVSAFDQVE RIKALGAIVS GNPYYVTALA DQYSEVGLGA ERADSMVRLG
DLSRAGVRWS LHSDMPMAPA DPLFLMWCAV NRVTTSGRVA APEQAVSAED ALRGVTIEAA
YSLQMEEEIG SLVRGKRANM TILAENPLEV DPMAIREIEV WGTVMEGRVL PVRSSDRAAA
TQQDASAGPR EAVSPNGAPA FDKAALEHAL KVTHAHHL
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