| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1985 |
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| Symbol | |
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| ID | 4077169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2090043 |
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| End bp | 2090789 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007300 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_613979 |
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| Protein GI | 99081825 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC GCCGCATCCT GCGCCTTGAG GGCCCAGACA CCCGCAGTTT CTTGCAGGGC
TTGGTCAGCA ATGATGTCAA CAAGGTACAG GACGGTCTTG TCTATGCAGC CATCCTGACG
CCCCAGGGCA AATATCTTGC GGATTTCTTC CTTGCGGCGG ATGGGGACGC AGTTCTCCTG
GATGTGGCAG AGGCGCTGGC GGATGATCTC GTGAAGCGGC TCAAGATGTA TAAGCTACGC
GCCAATGTGA CCCTTGAGGA GACCGACCTC AAGCTGCGCC GCGGCACCGG GGACGCCCCC
GAGGGGGCCC TGCCCGACCC CCGCCATCCT GCGCTTGGAT GGCGCCAGTA TGGCAAAGAG
ACGTTTGACG ATGGCAGCGA CTGGGACGTG ATCCGGGTGA CGCATGTGAT CCCCGAAACC
GGCATCGAAC TCACGCCCGA CAGCTATCTC CTCGAGGTGG GGTTTGAGCG GCTGAACGGC
GTCGATTTTC GCAAGGGATG CTATGTCGGC CAAGAGGTCA CCGCACGCAT GAAGCACAAG
ACCGAGTTGC GCAAAGGCCT GACACAGGTG GAGATCGACG GCACCGTCCC GGTGGGCGCA
CAGATCACCG CTGGCGGCAA AGCCGTGGGT CAGGTTTTTA CGCAATCGGG CGGAAAGGCG
ATCGCCTACC TGCGCTTTGA TCGCGCCAAG GGCGCGCTCG AGGCCGAAGG CACCGCGCTG
CGCTGGCCCG AGGCGCCCGC CGAGTGA
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| Protein sequence | MADRRILRLE GPDTRSFLQG LVSNDVNKVQ DGLVYAAILT PQGKYLADFF LAADGDAVLL
DVAEALADDL VKRLKMYKLR ANVTLEETDL KLRRGTGDAP EGALPDPRHP ALGWRQYGKE
TFDDGSDWDV IRVTHVIPET GIELTPDSYL LEVGFERLNG VDFRKGCYVG QEVTARMKHK
TELRKGLTQV EIDGTVPVGA QITAGGKAVG QVFTQSGGKA IAYLRFDRAK GALEAEGTAL
RWPEAPAE
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