Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1951 |
Symbol | |
ID | 4076901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2053848 |
End bp | 2054516 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638007266 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_613945 |
Protein GI | 99081791 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.861655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0267012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCCG CTCCTCTCCC TGCCTCCAGC TTTCTGTCCG GGGCCTCGGA GCGCCTGCGG GCCATGCTCG ACAGCCAAGC CACAGATGTT CATCTCGAAA CGGGCGATGT GCTCTTTGAG CGCGGCGACG AGGGCGACGC GCTTTATGCG ATCATCTCTG GCGCTCTTGA GATCTCCACC CTTTCCGCAG CGGGGCGCAA GCTCTCGCTT GATATGATGC GCCCGGGGGC GATCTTTGGT GAGATCGCAA TGTTCGATCC CGGCGAGCGC ACCGCCACCG CCACCGCCGC TGAACCAAGC CACCTGCGCC GCCTGCGTCA CAGGGACGTG CTGGCGCAGT TGACCAAGCA TCCCGAACTT GCGGGTGATA TGCTGAAGCT CGCGGGGCAG CGCATGCGCT GGATGAATAC ACAACTCAAT GAGCAAGTGT TCCTCCCCAT GCCGGTGCGT CTGGCGCGCA AGCTCCTCTA TCTCACGCCC GCGGATGGCA ACGGCCAGCT GAGCCTCTCG CAATCGGAAC TGGCCGAATT CGTCGGCGCC ACCCGCGAAG CGGTCTCAAA GACCCTGTCG AACTGGCGCA AGGCGGGCCT CATCGAGATC AGCCGCGGAG GACTGCACCT CAAAGATCGC GGCGGGCTGG CGGTTCTGGC CGACCCCGAA GGCATCTAA
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Protein sequence | MAAAPLPASS FLSGASERLR AMLDSQATDV HLETGDVLFE RGDEGDALYA IISGALEIST LSAAGRKLSL DMMRPGAIFG EIAMFDPGER TATATAAEPS HLRRLRHRDV LAQLTKHPEL AGDMLKLAGQ RMRWMNTQLN EQVFLPMPVR LARKLLYLTP ADGNGQLSLS QSELAEFVGA TREAVSKTLS NWRKAGLIEI SRGGLHLKDR GGLAVLADPE GI
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