Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1934 |
Symbol | |
ID | 4076885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2036243 |
End bp | 2037481 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007250 |
Product | aspartate kinase |
Protein accession | YP_613929 |
Protein GI | 99081775 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.167611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTAC TTGTGATGAA ATTCGGCGGC ACATCCGTCG CCAATCTGGA CCGCATTCGC CGCGCTGCCA AACGCGTTGG TGTCGAAGTG GCCAAAGGCT ATGACGTGAT CGTCATTGTC TCCGCCATGT CCGGCAAGAC CAACGAGCTG GTCGGTTGGG TGGGGGAGAC CTCGCCGCTC TATGATGCGC GTGAATATGA TGCGGTTGTA TCCTCTGGTG AGAATGTGAC CGCGGGCCTC ATGGCGTTGA CGCTGCAAGA GATGGACGTG CCCGCGCGCA GCTGGCAGGG CTGGCAAGTG CCGCTCAAGA CCAACTCGGC CCACAGCCAG GCCCGGATCG AAGAGATCGG CACAGAGAAC ATCAACCAGA AGTTCGGCGA AGGCATGAAA GTGGCCGTTG TTGCGGGCTT TCAGGGGATT TCTCCCGAAG GTCGCATCAC CACCCTCGGG CGCGGCGGCT CTGACACCAC AGCGGTGGCT TTTGCGGCGG CCTTCGGGGC GGAGCGCTGC GATATCTACA CCGATGTGGA CGGCGTCTAT ACCACCGACC CGCGCATCTG CGAAAAGGCA CGCAAGCTCG ACAAGATCGC CTTTGAGGAA ATGCTGGAGC TGGCATCCTT GGGCGCCAAG GTGCTGCAAA CCCGCTCCGT CGAGCTGGCG ATGCGCTACA AGGTGAAACT GCGCGTGCTC TCGAGCTTTG AAGAACAGTC CGACGAGGCC GGAACCCTGG TCTGCGACGA GGAGGAAATC ATGGAATCCA ATGTTGTTAA CGGCGTTGCC TACTCGCGGG ATGAGGCCAA ACTGACCTGT CTTTCGGTCG CGGACCGTCC GGGCATCGCG GCGACCATTT TTGGCTGCCT CTCGGATGCC GGCGTCAACG TCGATATGAT CGTGCAGAAC ATCTCTGAAG ATGGGCGCAC GGATATGACG TTCTCTTGCC CCACGGATCA GGTACAGCGC GCGGAAATGG CCCTGAACGC CTACAAAGAG AAGGGCGAGC TGAACTTTGC TGAACTCGTG GCGGACACCG GTGTTGCGAA GATTTCGGTG GTGGGCATCG GCATGCGATC GCAGTCCGGT GTGGCCGCCA AGATGTTCAA GGTCCTCTCG GATGAGGGCA TCAACATCAA GGTGATCACC ACCTCCGAGA TCAAGATTTC GGTGCTGGTG GACCGCAAAT ACATGGAGCT CGCCGTGCAG GCCCTGCACG ACGCCTTTGA GCTCGACAAA GCCAGCTGA
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Protein sequence | MPLLVMKFGG TSVANLDRIR RAAKRVGVEV AKGYDVIVIV SAMSGKTNEL VGWVGETSPL YDAREYDAVV SSGENVTAGL MALTLQEMDV PARSWQGWQV PLKTNSAHSQ ARIEEIGTEN INQKFGEGMK VAVVAGFQGI SPEGRITTLG RGGSDTTAVA FAAAFGAERC DIYTDVDGVY TTDPRICEKA RKLDKIAFEE MLELASLGAK VLQTRSVELA MRYKVKLRVL SSFEEQSDEA GTLVCDEEEI MESNVVNGVA YSRDEAKLTC LSVADRPGIA ATIFGCLSDA GVNVDMIVQN ISEDGRTDMT FSCPTDQVQR AEMALNAYKE KGELNFAELV ADTGVAKISV VGIGMRSQSG VAAKMFKVLS DEGINIKVIT TSEIKISVLV DRKYMELAVQ ALHDAFELDK AS
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