| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1889 |
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| Symbol | |
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| ID | 4077386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1990311 |
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| End bp | 1991252 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007205 |
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| Product | Pirin-like |
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| Protein accession | YP_613884 |
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| Protein GI | 99081730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGA ACCCGACACT TGAACCCATG TGCCCCGAAG CGGGCAATCT CGACAGTATC
GAGACGCTGG TGGTGCCCCG CGCGCGCGAC ATCGGTGGTT TCGAAGTGCG CCGCGCCCTG
CCTGCGCCCC GGCGGCAGAT GGTGGGGCCG TTCATCTTCT TTGATCAGAT GGGTCCGGCA
GAATTCCTCA CCGGCGCGGG CATCGACGTG CGCCCGCACC CTCACATCGG CCTTGGCACC
GTAACCTACC TCTATCAGGG TGAGTTTGAG CATCGCGACA GCCTCGGCAC CCATCAGATG
ATCTATCCGG GCGAGGTGAA CTGGATGGTG GCTGGCAACG GCGTCACCCA TTCCGAGCGC
ACCTCGGAAG CCACCCGCAA GGGCCAGAGC AGCCTCTTTG GCATCCAGAC CTGGATCGCG
CTGCCGGAAA ACAAGGAAGA CATGGCGCCA GTGTTTGAGC ATCACGGCAA AGAAGCCCTG
CCGCATCTGC TGGGGGAAGG CAAAGAGGTG CGCCTGATCC TCGGCACCGC CTGGGGAGAG
ACCGCGCCTG TCACCATGCA CTCGGAAACC TTCTACGCGG ACGTGATCCT GGAGGCGGGG
GCAAAGCTGC CGATGCCCGA CAACCACGAG GACCGCGGGC TGTATATCAC CCGTGGTGCA
GTCGAGATCG CAGGCCAGAC CTTTGGCGCC GGGCAGATGA TGGTCTTTCG CCCCGGTGAT
GCGATCACGG TCACCGCAGG TCCCGAAGGC GCGCGGCTGA TGGCGCTCGG CGGTGAGACC
ATGGGCGGGC CGCGCCACAT CTGGTGGAAC TTCGTCGCCT CCTCCAAGGA GAAGATCGAA
GAGGCCAAAC AGGCCTGGGC GCGCGGCGAT TTTGCCAGCA ATCCCCGCTT TCAGCTGCCA
CCGGGCGATG ACAGTGAATT TATCCCGCTG CCCGAGCGCT GA
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| Protein sequence | MSWNPTLEPM CPEAGNLDSI ETLVVPRARD IGGFEVRRAL PAPRRQMVGP FIFFDQMGPA
EFLTGAGIDV RPHPHIGLGT VTYLYQGEFE HRDSLGTHQM IYPGEVNWMV AGNGVTHSER
TSEATRKGQS SLFGIQTWIA LPENKEDMAP VFEHHGKEAL PHLLGEGKEV RLILGTAWGE
TAPVTMHSET FYADVILEAG AKLPMPDNHE DRGLYITRGA VEIAGQTFGA GQMMVFRPGD
AITVTAGPEG ARLMALGGET MGGPRHIWWN FVASSKEKIE EAKQAWARGD FASNPRFQLP
PGDDSEFIPL PER
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