| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1865 |
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| Symbol | |
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| ID | 4077890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1964662 |
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| End bp | 1966647 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007181 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_613860 |
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| Protein GI | 99081706 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAC TGCCGGGCTT TGGCCCGTTC ACCCGTGGGG TGAAGGCCAC CATGTATGCA
GGCCGCCGCT GGACCATCCG CCAATACGCG GGCTTCTCCA CGGCCGAAGA ATCCAACGCC
TTTTACCGCC GCAACCTTGC CGCTGGTCAG CAGGGGGTCT CGGTGGCTTT CGATCTCGCC
ACCCACCGCG GCTATGACAG CGATCACGAG CGCGTCGTCG GTGATGTCGG CAAGGCGGGC
GTTGCCATCG ACAGTGTCGA GGATATGAAG ATCCTGTTTG ACGGCATCCC GCTCGATCAG
GTTTCGGTCT CCATGACCAT GAATGGCGCG GTGATCCCGA TCCTGGCGAG CTTCATCGTC
GCAGGTGAAG AACAGGGCCA CGACAAGGCG CTCCTCTCCG GGACCATCCA GAACGACATC
CTCAAGGAGT TCATGGTCCG CAACACCTAT ATCTATCCGC CAGAACCCTC GATGCGGATC
ATCGCGGACA TCATTGAATA CACCTCGAAC GAGATGCCGA AGTTCAACTC CATCTCGATC
TCCGGCTACC ACATGCAGGA GGCGGGCGCG AACCTCGTTC AGGAACTCGC CTATACGCTG
GCGGATGGGC GCGAATACGT CAAAGCCGCC ATCGAGGCGG GCATGGACGT GGACAAATTC
GCAGGCCGTT TGTCGTTCTT CTTTGCCATT GGCATGAACT TCTTCATGGA GGCGGCCAAG
CTGCGCGCCG CGCGTACGCT CTGGCATCGG GTGATGACGG AATTCGGCGC CAAATCCGAC
CGCTCCAAGA TGCTGCGCAC CCATTGCCAG ACCTCGGGCG TGAGCCTGCA GGAGCAGGAT
CCTTACAACA ACGTGATCCG CACCGCCTAT GAGGCGATGA GCGCGGTTCT GGGCGGCACG
CAAAGTCTGC ACACCAACGC TTTGGATGAG GCGATTGCGC TGCCCACCGA TTTCTCTGCC
CGAATTGCGC GCAATACCCA GTTGATCTTG CAAGAAGAAA CCGGCGTCAC CAATGTCGTC
GATCCGCTTG CCGGCAGCTA TTATGTCGAG AGCCTCACCG CAGAGCTCGT CGACAAGGCC
TGGGCGATGA TGCAGGAAGT GGAGGAGATG GGCGGCATGA CCAAGGCCGT GGCCTCCGGC
ATGCCGAAAC TGCGCATCGA GGAAACTGCC GCCCGCCGTC AGGCGATGAT CGACCGCGGC
GAAGAGGTGA TCGTCGGCGT CAACAAATAC CGCAAGGACA AGGAAGACCC CATCGACATC
CTCGATGTGG ACAACGTCAA GGTGCGCGAG AGTCAGATCG CCCGGCTTGA ACAGATCCGC
GCCAGCCGCG ATGCGGCGGC CTGCGAGGCG GCGCTGGCCG AACTCACCCG CCGCGCGTCT
GAGGGCGGCA ATCTTCTGGA AGCAGCCGTC GAGGCCGCCC GCGCGCGCGC CACTGTGGGG
GAAATCAGCA TGGCAATGGA AAAAGAATTC GGTCGTCACC GCGCCGAGGT CAAAACCCTC
GCAGGCGTCT ACGGCGCCGC ATACGAGGGC GACGAGGGCT TTGCCGCGAT CCAGAAATCC
ATCGAGTCCT TTGCCGAGGA AGAGGGCCGC CGCCCGCGTC TTCTGGTGGT CAAGATGGGG
CAGGACGGTC ACGACCGGGG CGCCAAGGTG ATCGCCACCG CCTTTGCTGA CATTGGCTTT
GACGTGGATG TGGGACCGCT GTTCCAGACC CCGGCAGAGG CCGCGCAGGA TGCCATCGAC
AATGATGTGC ATGTGGTCGG TATCTCCAGC CAGGCGGCGG GTCACAAGAC GCTCGCCCCC
CAGCTGATCG CCGAACTCAA AGCCGCCGGG GCGGAGGACA TCATCGTGAT CTGTGGCGGG
GTGATCCCGC AGCAGGATTA TGACTTCCTC TACAAGGCGG GTGTCAAAGC GATCTTTGGT
CCCGGCACCA ATATCTCCAC CGCGGCACAG GATATTCTCG AACTCATCCG CGAAGCGCGC
AGCTAA
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| Protein sequence | MGTLPGFGPF TRGVKATMYA GRRWTIRQYA GFSTAEESNA FYRRNLAAGQ QGVSVAFDLA
THRGYDSDHE RVVGDVGKAG VAIDSVEDMK ILFDGIPLDQ VSVSMTMNGA VIPILASFIV
AGEEQGHDKA LLSGTIQNDI LKEFMVRNTY IYPPEPSMRI IADIIEYTSN EMPKFNSISI
SGYHMQEAGA NLVQELAYTL ADGREYVKAA IEAGMDVDKF AGRLSFFFAI GMNFFMEAAK
LRAARTLWHR VMTEFGAKSD RSKMLRTHCQ TSGVSLQEQD PYNNVIRTAY EAMSAVLGGT
QSLHTNALDE AIALPTDFSA RIARNTQLIL QEETGVTNVV DPLAGSYYVE SLTAELVDKA
WAMMQEVEEM GGMTKAVASG MPKLRIEETA ARRQAMIDRG EEVIVGVNKY RKDKEDPIDI
LDVDNVKVRE SQIARLEQIR ASRDAAACEA ALAELTRRAS EGGNLLEAAV EAARARATVG
EISMAMEKEF GRHRAEVKTL AGVYGAAYEG DEGFAAIQKS IESFAEEEGR RPRLLVVKMG
QDGHDRGAKV IATAFADIGF DVDVGPLFQT PAEAAQDAID NDVHVVGISS QAAGHKTLAP
QLIAELKAAG AEDIIVICGG VIPQQDYDFL YKAGVKAIFG PGTNISTAAQ DILELIREAR
S
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