| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1841 |
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| Symbol | |
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| ID | 4077866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1942779 |
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| End bp | 1943336 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007157 |
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| Product | polyhydroxyalkonate synthesis repressor, PhaR |
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| Protein accession | YP_613836 |
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| Protein GI | 99081682 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.126863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.68112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGAAC AGGATAAGCC TCTGCTGATC AAACGCTATG CCAGTCGCAG GCTCTACAAT
ACGGAGACCA GCGATTACGT GACACTGGAA GACATCGCCG GTTTTATCCG CGATGGGCGG
GAAGTGCAGA TCATTGATCT CAAGACCGGG GATGACCTGA CCCGACAGTA TCTGCTTCAG
ATCATTGCCG AGCATGAGAG CCGGGGCGAA AATGTGCTGC CGGTCAATGT GCTGAATGAT
CTGGTGCGCA GCTACATGGT GCCCGGAGGC GGGGTGATGC CGCAGTTTCT GCAGGCTTCT
TTTGACATGT TTCGCGACAG CCAGTCGAAG ATGATGGAGA ACATGAATGC GATGAACCCG
ATGGCGCAGA TGCCCGGGTT CGAGGCAATG AAAGCCCAGC AGGAAGCGTT TCTGAAGGCC
ATGACCGGCG GCTTTGGCGG CGGCTGGACC GGCGGCGGTG GCGAGGACGG CAGCCCTGCG
GCAGAGGGCG AAGAAGATCT GGGCGACATC AAACGCCAAC TAGCCGAGTT GCAAGAGAAG
CTCTCCAAGC TGAGCTGA
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| Protein sequence | MAEQDKPLLI KRYASRRLYN TETSDYVTLE DIAGFIRDGR EVQIIDLKTG DDLTRQYLLQ
IIAEHESRGE NVLPVNVLND LVRSYMVPGG GVMPQFLQAS FDMFRDSQSK MMENMNAMNP
MAQMPGFEAM KAQQEAFLKA MTGGFGGGWT GGGGEDGSPA AEGEEDLGDI KRQLAELQEK
LSKLS
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