Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1839 |
Symbol | |
ID | 4077864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1939640 |
End bp | 1940950 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638007155 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_613834 |
Protein GI | 99081680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.131772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.38658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA ACCTGCTGCA TGCAAACGAC CGACCCGGAA AATACCCCCA AAGCTGGTAC GCCGCCACCG CAACGCCGGG GGTGCATTAC CCGTCTTTGA CGGGTGGGGT CAGGGCGGAT GTCTGCATTG TGGGCGCGGG CTACACCGGG CTCTCGGCGG CGCTGCATCT GGCCGAGGCG GGCCGCTCCG TAGTGCTGTT GGATGCGCAG CGTGTGGGCT TTGGGGCGTC CGGGCGCAAT GGTGGGCAGC TCGGGTCCGG CCAGCGCCAG GACCAGGAGG TGCTGGAGAA AATGGTGGGC GCCGAGGATG CCGCCCACCT GTGGCGCCTC GGCGAAGAGG CCAAGGACCT CGTCAAAGAC CTGATCTCCA AGCACCAGAT CGACTGCCAC CTGAAGCCGG GCGTGGCCTG GACTGCGGAA CGTTCGGGCG ATGTGACGCA TCTTCATGAC TACGGTCGCC ACCTTGAAGA CCGCTATGGC TATGATCAGA TTGAGTTTCT GGATCAGGAC GCCTGCCACG CCATGTGCCC CTCCCCGGCC TACAAGGGCG GTATTCTGGA TCATGGCGCG GGGCATCTGC ACCCGTTGAA TTTTGCGCTG GGTCTGGCGC GGGCCGCTGC AGAGGCCGGT GCGCAGATCT ATGAGCGCAG CGAAGTCTTT GCCATCGAGG ACGGACCGCA GGTGGAAGTG CGCACGGGCG AGGGCACCGT GCGGGCCGAT CACGTTATAC TGGCCTGCAA CGGCTATCTC GGCGGGCTCA ACGAGCAGGT CGCCACACGC GTGATGCCGA TCAACAATTT TGTCGCCGCC ACCGAGCCTC TGGGCGATGA CGCCGCGCAG GTTCTGGCGC GCGATGTGGC CGTGGCGGAC AGCAAATTCG TGGTGAACTA TTTTCGCCTG AGCCATGACA AGCGGCTGCT GTTTGGCGGC GGAGAAAGCT ATGGTTATCG CTTCCCGAGC GACATTGCCG CCAAGGTGCG CAAACCCATG ACGGAGATCT TTCCGCATCT TCATGATGTA AAGATCGACT ACGCCTGGGG CGGCACCCTG GGGATCACCA TGAAGCGTCT GCCCTATCTG GCGCGGGTGT CGCCGCGGAT CCTCTCGGCC TCAGGGTATA GCGGTCATGG GGTCGGCACC GCCACCCATG CGGGGCGGCT GCTGGCAGAG GCCATCGCAG GCCAGAGCGA GGGGTTCAAC ACGATGGCGC GCATTCCCAC GACGCCCTTC CCGGGTGGCC CCAGGATGCG CTCTCCGCTT CTGGTGCTGG CGATGACGTG GTTCTCCTTG CGCGACCGGT TGGGGATCTG A
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Protein sequence | MTLNLLHAND RPGKYPQSWY AATATPGVHY PSLTGGVRAD VCIVGAGYTG LSAALHLAEA GRSVVLLDAQ RVGFGASGRN GGQLGSGQRQ DQEVLEKMVG AEDAAHLWRL GEEAKDLVKD LISKHQIDCH LKPGVAWTAE RSGDVTHLHD YGRHLEDRYG YDQIEFLDQD ACHAMCPSPA YKGGILDHGA GHLHPLNFAL GLARAAAEAG AQIYERSEVF AIEDGPQVEV RTGEGTVRAD HVILACNGYL GGLNEQVATR VMPINNFVAA TEPLGDDAAQ VLARDVAVAD SKFVVNYFRL SHDKRLLFGG GESYGYRFPS DIAAKVRKPM TEIFPHLHDV KIDYAWGGTL GITMKRLPYL ARVSPRILSA SGYSGHGVGT ATHAGRLLAE AIAGQSEGFN TMARIPTTPF PGGPRMRSPL LVLAMTWFSL RDRLGI
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