| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1833 |
|---|
| Symbol | |
|---|
| ID | 4076979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1931108 |
|---|
| End bp | 1931575 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007148 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_613828 |
|---|
| Protein GI | 99081674 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.524145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TTGCACTGAC CACCGCCGCA ATCTCTGCCC TGATGGCTGC CCCGGCAATG
GCCGATCTGA ACACTGCGGC TGCGCAGACG TTCACTGAGA TGAAAGAGGC CTATCCCGCG
ATCGACCGCA AGATCTTTGA GCAGGTCGAC GTGAACAAGG ACGGTGTCGC CGATATGGCA
GAGGTTGATG CGGCCGAGCA GTCGGGCGTG CTGAACGATG ACATGAGCGC AGCAGAGGCC
ACAGGCACCT ACGACCCCTC GCCATATGGT GTGGAGGAAG CCGGTGCGCT GACCTTCGCT
GAGCTGAAGG ACGCCTATCC GTCGCTCACC AAGAAAGTCT TTGAAGAAGT CGACGCGAAC
AAAGACGGCG TCGCGGATAT GGCGGAAATC GATGAGGCCG AGCTCTCTGA TGTTCTGGAG
CCGGGGATCG GGAACACGGC TGAAGGCCAG TCCTACAACC AAGGGTAA
|
|---|
| Protein sequence | MKRFALTTAA ISALMAAPAM ADLNTAAAQT FTEMKEAYPA IDRKIFEQVD VNKDGVADMA
EVDAAEQSGV LNDDMSAAEA TGTYDPSPYG VEEAGALTFA ELKDAYPSLT KKVFEEVDAN
KDGVADMAEI DEAELSDVLE PGIGNTAEGQ SYNQG
|
|---|
| |