Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1825 |
Symbol | |
ID | 4076971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1920125 |
End bp | 1920685 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007140 |
Product | hypothetical protein |
Protein accession | YP_613820 |
Protein GI | 99081666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0697125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.518045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATT TCCTTGCTCT GCTGGCAATG GCCGCTGCCA CGCCGGCCCT TGCCGACTCC TATTGCGACG ATCTGTGGTT CACCCGAAAT GCCATCATGG ACCGGGCGGG CTATTGCTTT GGCTCTTCTC TTGGAAAACA TGTCTTTGAC AATGGCGATT GCATCGGGAC CTCTGTCACC CTCTCAGAGA TGGATGCGAC CCGGGTGGCC AAGCTCAAAG CGCAGGAACG CGAAGCCGGA TGCCGGGTCG ATACCAGCCG CAGCAGGCTC GATGTCTTGG ACCTGCGCTA CCGGCAGCGG CTGGTGGACC TTCCGGTGAC AGATGGGCTG GAAAGCACCT GCATCGGCTG GCGCGGCGAT CCCCTGCCCC TGCGCGCAGG CCATGGCCTC AATACGGATG TGATAGGGCA GGTCCTGCCC GGAGACACGC TCAACTACGG CCATTATCCA GTGGGCGGCT GGAGCTATGT GACGGTGCAT GACAGCGACT GGCACCTCAA GAGCGCAGGT TGGTATCGCG TTGATGCCTA TCCGCAGCGG TGCGCCCAGT TCGCCGGGTG A
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Protein sequence | MKYFLALLAM AAATPALADS YCDDLWFTRN AIMDRAGYCF GSSLGKHVFD NGDCIGTSVT LSEMDATRVA KLKAQEREAG CRVDTSRSRL DVLDLRYRQR LVDLPVTDGL ESTCIGWRGD PLPLRAGHGL NTDVIGQVLP GDTLNYGHYP VGGWSYVTVH DSDWHLKSAG WYRVDAYPQR CAQFAG
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