| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1792 |
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| Symbol | |
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| ID | 4076821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1885491 |
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| End bp | 1886138 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007107 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_613787 |
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| Protein GI | 99081633 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.303852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0332826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGGC CTGACGCGCA AACCAAGATG CAGTTTCTCT TTGCCCTGCG CTCGCGCGGG
GTCACCGAAG CTGCCGTTCT GGAAGCCATG GAGGCCGTGG ATCGCGGCCT GTTCCTGCGC
GGCATTTTTT CGGAACGCGC CTATGAGGAT GTGCCGCTGC CGATTGCCTG TGGTCAGACG
ATTTCGCAGC CCTCCGTTGT GGGCCTGATG ACTCAGGCGC TGCAGGTCAA TCCCCGCGAC
ACCGTGCTCG AGGTGGGGAC CGGCTCGGGC TATCAGGCGG CGATCCTCGC CAAGCTGGCG
CGCCGAGTCT ATACTGTCGA CCGCCACGGA CGCCTTGTGC GCGAGGCTCG GCAGGTGTTC
CAGCAAATGA GCCTGTCCAA TATCACATCC CTGGTGGGCG ATGGCAGCCA TGGCATGCCG
GATCAGGCGC CGTTTGATCG AATCATCGTC ACCGCCGCTG CCGAAGATCC CCCCGGCCCG
CTCTTGGCGC AGTTGAAGGT CGGCGGCATC ATGGTGGTCC CGGTGGGCCA ATCGGATGCG
GTCCAGACCC TGATCCGCGT CCGAAAGACC GAAAATGGGC TGGAATATGA CGAATTGCGC
CCCGTGCGCT TTGTTCCTCT GCTGGAAGGG CTTGGAAAAG ACACCTGA
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| Protein sequence | MSGPDAQTKM QFLFALRSRG VTEAAVLEAM EAVDRGLFLR GIFSERAYED VPLPIACGQT
ISQPSVVGLM TQALQVNPRD TVLEVGTGSG YQAAILAKLA RRVYTVDRHG RLVREARQVF
QQMSLSNITS LVGDGSHGMP DQAPFDRIIV TAAAEDPPGP LLAQLKVGGI MVVPVGQSDA
VQTLIRVRKT ENGLEYDELR PVRFVPLLEG LGKDT
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