| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1622 |
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| Symbol | |
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| ID | 4077724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1728820 |
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| End bp | 1730139 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006935 |
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| Product | hypothetical protein |
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| Protein accession | YP_613617 |
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| Protein GI | 99081463 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.264122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA TCCTGGAACT GCGAGCCCGC CGCGCGGGTA TCATCGACCG TATGGACGCG
CTGGTTGCGT CAATCGGCGA TGGGGAGGAA TGGACAGAGG ATCAGACTGC CCAATTCGAT
GCCCTGAAGG CCGAAGATGA TAAGGTGACG GCAGAGCTCA CCCGCCTTGA AGATGTGGAG
CGCCGCCGCG CTGAGGCCGC GCGTCCGGCC GCGCCGCTGC CTGGTGCTGC GGGCACCGAA
GCTGGTGGGG TACCGACTGC ACCCGCAGCC CCGAAGGAGC CAGGCCTGCA GTTCGCTCGC
ATGGTGCGCA CGATCGCGGC GGCGGGCGGC AACCAGTATG TTGCACAGCA GATCGCCGAG
GCGAGCGGAG ACAGCGGTCT TTTTGCCAGC CAGAACATGT CCACCGGCAC CGCCGGCGGA
TTTCTGGTGC CGGAAGATGT GTCCAGTGAG GTGATCGAGC TGTTGCGCCC GCTCAGCGTC
GTTACAGCGA TGGGCCCGCG TATTGTTCCC ATGCCGAACG GGAATATGAC TACCAACCGC
CGCGCGAGCG GAGCAAATTT CGAATATGGC GGTGAGCAGC AGGACATCAA GGCAACCGGA
TACGAGTATG GTCAGGTGAA GCTGTCGGCG AAGAAGCTGA GCGGGATCAT CCCGATATCC
AATGACCTGC TGCGCACGGC CTCCACGGCC GTCGACCGAA TGGTGCGCGA TGATGCACTG
GCCGATGCTG CGCAGATCCA GGATCGTCAT TTCCTCCGCG GTGCGGGAAC AGATTATGCG
CCAAAGGGGC TTCGTTTCCA GCACACGGGC ACGCCTTTCG CCGCGACCCA TGTGCTGACG
ATGACCGCTG CGCCGGATCT GCAAAAGGTG GATAACGATC TCGGCCGCCT CGAGCTCGCT
CTGGCGAACA ACAATGTCGT TGTGACCGGG GCGCATTGGA TCATGTCGCC GCAAATTGCG
ATGTTCCTGA CCAACCTGCG CGACGGCAAT GGCAACAAGG TTTATCCGGA GATGGCCAAT
GGCCAGCTGC GCATGAAACC GGTGCACATC ACCACCGAGA TCCCGAGTAA CCTTGGTGGA
GGCGGCAACG AGTCCGAGAT CATGCTGGCG CATCCGGGTC ACATCCTTGT TGGTGAGCAC
ATGGGCATTG AAGTCGCGAT GTCTACCGAA GCGGCCTACA AGGACTCCGC GGGCAATATG
CAGGCCGCGT TCTCTCGCGA CGAGACACTG ATGCGGATGA TCATGCAGCA TGACATTGGC
CTGCGCCATC TGCCAGCCGT GGCCGTCCTT ACGGGCGTCA CTTGGGCACC CGGCCTCTGA
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| Protein sequence | MDKILELRAR RAGIIDRMDA LVASIGDGEE WTEDQTAQFD ALKAEDDKVT AELTRLEDVE
RRRAEAARPA APLPGAAGTE AGGVPTAPAA PKEPGLQFAR MVRTIAAAGG NQYVAQQIAE
ASGDSGLFAS QNMSTGTAGG FLVPEDVSSE VIELLRPLSV VTAMGPRIVP MPNGNMTTNR
RASGANFEYG GEQQDIKATG YEYGQVKLSA KKLSGIIPIS NDLLRTASTA VDRMVRDDAL
ADAAQIQDRH FLRGAGTDYA PKGLRFQHTG TPFAATHVLT MTAAPDLQKV DNDLGRLELA
LANNNVVVTG AHWIMSPQIA MFLTNLRDGN GNKVYPEMAN GQLRMKPVHI TTEIPSNLGG
GGNESEIMLA HPGHILVGEH MGIEVAMSTE AAYKDSAGNM QAAFSRDETL MRMIMQHDIG
LRHLPAVAVL TGVTWAPGL
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