Gene TM1040_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1602 
Symbol 
ID4077704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1713369 
End bp1714235 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID638006915 
Producthypothetical protein 
Protein accessionYP_613597 
Protein GI99081443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.11697e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.653489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAT TTTTTGCAAA TGTTGGTGTT GTGCTGTCGG CAATTGGACA GGGTTTAAAG 
GAAGATCCAG CTAAGTTTCA GCACCTAATT GGTGGGGGCT TAGCGTTTTT TGGTGTCTTG
CTGACGGTGT GGACAACAGG CCGACGTCTC CGAGAGCAGC TCGCTCACGC TACGCAGCTG
GATAAAGCAC GTCATGAAAG GGACTTAGAG GTCAAGCGTC GTTCCTTGAA GGGAGCACTT
TCTGCTGAAC TTTCAGTTAT CTCAGGCTTC CTAAGAGACG AAGATATCCA ACTGCGTAAG
TGGATCACCC CTGACTGGAA GACCATTGAA GAATTGCGCG TCGAACCTGA CGAGGCAATC
GATCTCGAAC TGCTAGTACC AGAAGTTAAG AAGACCGACA CGCTCAATAG ACCTGAAGCC
CCTTACAGGT TCTCTATGCC TGAGAGGGAC GAAATCTATA GCGCGCTCGT AGGTGAACTT
GCGGTTCTAA GTGTAGAAGA AATTCAGACA ATCATCGTCG CATACGACAA GTTTCAGTCA
TTTAAAAGCT GGGTTAAAGA ACATTGTGAT GACCAGGTCG AGCAGACAAA CGTCTATATT
TTTTCGAAGG GAAAAGACCT GTGTTCTCTC CAAGCTCAAA TTGAAGATGC CAAGACGGAA
CTAGACTGGT ACTTGAGTAC GCTGCTAGAT GAGATTACTT TGAAGGAGCC GGCATCTAGC
AGCGCATCAA AATGGTGTAG TTTTGTATCC CCAAGCTACT TGGTATTACT TGGTGCGAGC
TTTTTGTTTG GATTTTGGGT CAATAGTTCA ACTGTTGAGA ATGAACCGAC AAGCACTAAT
GAGACTAAGT CGATTAAATC GAAATAG
 
Protein sequence
MTEFFANVGV VLSAIGQGLK EDPAKFQHLI GGGLAFFGVL LTVWTTGRRL REQLAHATQL 
DKARHERDLE VKRRSLKGAL SAELSVISGF LRDEDIQLRK WITPDWKTIE ELRVEPDEAI
DLELLVPEVK KTDTLNRPEA PYRFSMPERD EIYSALVGEL AVLSVEEIQT IIVAYDKFQS
FKSWVKEHCD DQVEQTNVYI FSKGKDLCSL QAQIEDAKTE LDWYLSTLLD EITLKEPASS
SASKWCSFVS PSYLVLLGAS FLFGFWVNSS TVENEPTSTN ETKSIKSK