| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1572 |
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| Symbol | |
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| ID | 4078381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1680082 |
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| End bp | 1680576 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006885 |
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| Product | cytidine deaminase |
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| Protein accession | YP_613567 |
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| Protein GI | 99081413 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAG GCCCGAGGCC CCACGCGCTG GCGCAGGATC GTCAGCCACG GCCCCCTGCG
AGGACGGAGA TCATTATGCC TGCATCAGAC ACCGATACTA TTCATCCATT GCGCGCAGCC
GCTGCTACGG TGCGCCAGAA TGCCCATGCG CCCTATTCGA ACTTCAAGGT GGGCGCGGCG
ATCCGGGCCA AATCCGGCAC GGTCTATGTG GGCTGCAATG TCGAAAACGT GGCCTATCCC
GAAGGCACCT GTGCCGAGGC CGGTGCGATT GCGGCGATGG TGGCGGCCGG TGAAACTGAA
CTTCTTGAGG CCTATGTGAT CGCCGATTGC CCAAGCCCGG TGCCGCCCTG CGGCGGCTGC
CGTCAGAAGC TCAAGGAATT CGGCGCTGCC GAGGTCGCGG TGACCCTTGC AACCACCGAT
GGCGTCGAAA TGCAGACCAC GATTGGTGAT CTGCTGCCTG GCGCGTTTGA CGCAGGCCAT
ATGGAGCGGA GCTGA
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| Protein sequence | MPQGPRPHAL AQDRQPRPPA RTEIIMPASD TDTIHPLRAA AATVRQNAHA PYSNFKVGAA
IRAKSGTVYV GCNVENVAYP EGTCAEAGAI AAMVAAGETE LLEAYVIADC PSPVPPCGGC
RQKLKEFGAA EVAVTLATTD GVEMQTTIGD LLPGAFDAGH MERS
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