| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1545 |
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| Symbol | |
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| ID | 4075843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1652518 |
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| End bp | 1653561 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006858 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_613540 |
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| Protein GI | 99081386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.256667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0827797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAAA CTCTTTCCGA TTTTCTCGCG CATGGGCATG ACACGGTGAT CGATGTGCGC
AGCCCGGCGG AATACGCCGA GGATCACGTG CCCGGCGCGA TCAATCTGCC AGTGCTAGAC
AACGCCGAAC GCGCCGACGT GGGCACAATT TATGTGCAGC AGAGCCCGTT TCTGGCGCGC
AAGATCGGGG CAGCGATGGT GTTTCGCAAC GCCGCTGACC ATATTGAACA TCGGCTGAGC
CACCACGAAG GCAGTTGGAA ACCTCTGGTC TATTGCTGGC GCGGCGGTCA GCGCTCCGGT
AGCTTTACCT GGATGCTGAG CCAGATTGGC TGGCGGGCCG AAGTGGTCAA GGGCGGTTAT
CAGAGCTATC GCCGGCTTGT GCATCAGGCG ATGTATGAGG CGCCGCTTGC GCATCGTTTG
ATGCTGCTCG ACGGGCTCAC TGGAACCGCC AAGACCGAGA TCTTGAAACA GGTCGCCGAG
ATGGGCGGCC AGGTGTTGGA TCTCGAAGGC TTTGCGGGGC ATCGTGGCTC GCTCTTGGGC
GAGATGCCGG GCGGGCAGCC AAGTCAGAAA CGCTTTGAAA GCTACATCGC CTGTGCTCTT
GCCCAGATGG ATCCGGCACG TCCGGTGCTC GTTGAGGCAG AAGCCAGCAA GATCGGCGCA
CGGATCCTGC CTCCGAGCCT CTGGGATGCC ATGAAGGCGG CGCCACGGAT TGATCTTGAG
GTGCCCTTCG CGGCGCGTTG TGCCTATTTG CTGGAGGCTT ACGACGACAT CCTGTCGAAC
GCAGAGACCC TGCGCGAAAA GCTCGGACTT CTGCGCGAGC ACCGCTCAGG CGCTGTAGTA
GATGCCTGGT TCGAGCTCAT CGCGGCGGGG GATAAACCTG CGCTGGTGGC GCGGCTGATG
GCGGATCACT ATGATCCGGC CTATCGCAAG GCGCGCAGCC GATATGAGGT GAGCGACCAG
CGCAAGGTTG CCTTGACGGG ACTTGACGAG GCCGCGCGCA AACAGGCAGC TCAGCGGATC
TTGGAGCTGC TCGACGCATC CTGA
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| Protein sequence | MFQTLSDFLA HGHDTVIDVR SPAEYAEDHV PGAINLPVLD NAERADVGTI YVQQSPFLAR
KIGAAMVFRN AADHIEHRLS HHEGSWKPLV YCWRGGQRSG SFTWMLSQIG WRAEVVKGGY
QSYRRLVHQA MYEAPLAHRL MLLDGLTGTA KTEILKQVAE MGGQVLDLEG FAGHRGSLLG
EMPGGQPSQK RFESYIACAL AQMDPARPVL VEAEASKIGA RILPPSLWDA MKAAPRIDLE
VPFAARCAYL LEAYDDILSN AETLREKLGL LREHRSGAVV DAWFELIAAG DKPALVARLM
ADHYDPAYRK ARSRYEVSDQ RKVALTGLDE AARKQAAQRI LELLDAS
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