| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1480 |
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| Symbol | |
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| ID | 4077777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1581224 |
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| End bp | 1582147 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006792 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_613475 |
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| Protein GI | 99081321 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.245912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAT CGCAACCCAC CGATGGGTTC AACCCCAAAC CCGGCTTCGC AGAGATGATC
GCTCCCGGCA TCCGCCGAAT TCTGGCGCCC AACCCCTCGC CGATGACCTA TCGCGGGACC
AACACCTATC TGATCGGTAC GCGCAATCTG GCGGTGATTG ACCCCGGGCC AGGCTCAGAG
CCCCATCTTG AGGCAATCCT GTCGAGCCTG AACGCTGGTC AATCCATCGA CGCCATTCTG
GTGACCCACA GCCACCTTGA TCATTCTCCG CTTGCAAAGC GTCTCCAAGA GGAAACCGGC
GCAGCGATCT ATGCTTTTGG ACCCGCGGGC GCCGGGCGCA GTGCGATCAT GGAAACGCTC
GCCCAGGAGG ACGTCACGGG TGGTGGCGAA GGGATCGATC ATGCCTTCAG CTGCGATCAT
GTCCTCAAGG ATGGCGAGAC GCTGTCCGGT CCGGATTGGC AGATCGAGGC CCTGCATACC
CCGGGGCACC TTGGCAATCA TCTGTGCTTT GCGCTCGGCG ATATCTTGTT CTCGGGCGAT
CATGTGATGG GGTGGGCAAG CTCTCTGGTT TCGCCCCCGG ATGGGGACCT TACGGATTTC
ATGGCCTCCT GTCGCAAGCT GCAAGATCGT CAGTGGTCCC GTTTCCTGCC CGGCCACGGC
GCCCCGATCG ACGCCCCGCA TGCGCGTCTC GACTGGCTGA TTGCGCACCG GTTGGAGCGA
GAGCGCGCGA TTCTCGCGGA ACTTCGGATC GCACCCAGAA CCGTCTCGGA ACTGGCGGCC
ACGATCTACA AGGAGACGCC CGCCGCGCTT CTTAAGGCCG CAGAGCGCAA CGTATTTGCC
CATCTCGTGG ATCTGACACA ACGCAATATC GCGCAGCCCG AAGGTGCTCT GAGCCTTTCA
ACGCGTTTCT CCTGTACCGA TTGA
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| Protein sequence | MSRSQPTDGF NPKPGFAEMI APGIRRILAP NPSPMTYRGT NTYLIGTRNL AVIDPGPGSE
PHLEAILSSL NAGQSIDAIL VTHSHLDHSP LAKRLQEETG AAIYAFGPAG AGRSAIMETL
AQEDVTGGGE GIDHAFSCDH VLKDGETLSG PDWQIEALHT PGHLGNHLCF ALGDILFSGD
HVMGWASSLV SPPDGDLTDF MASCRKLQDR QWSRFLPGHG APIDAPHARL DWLIAHRLER
ERAILAELRI APRTVSELAA TIYKETPAAL LKAAERNVFA HLVDLTQRNI AQPEGALSLS
TRFSCTD
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