| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1469 |
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| Symbol | |
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| ID | 4077766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1570319 |
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| End bp | 1571401 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006780 |
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| Product | radical SAM family protein |
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| Protein accession | YP_613464 |
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| Protein GI | 99081310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.637197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACA CGGATCCTTT TTCGCCTCGA TGTCGCAAAG CGCGCGGTGC GCTCAGCAAT
GCGGCAGGCC GGTTTGATCT GGCGCGCGAG GCGCAGGACG ATGGCTGGTG GCAGGAGGCG
CCGGATCCTT CTGTTGCGAC AGAGATTCGC AACGAGCTAG CGCGCAGCCT GATCTCTTAC
AACCGTTCGC CGGATCTGCC CTTTGACCGC TCGATCAACC CCTATCGCGG CTGTGAGCAA
GGTTGCGTGT ATTGTTTTGC GCGCCCGTCG CATGCCTATC TCGGCCTGTC GCCGGGGCTG
GATTTCGAAA CCCGGCTTGT TGCACGCAGC AACGCGGCAG AGGTGCTGCG AAAAGAGCTC
TCGGCGCGGA GCTACAAGGT CGCGACCCTG GCCATCGGCA CCAACACGGA TCCCTATCAG
CCCTGCGAGC GGGATCATCT CTTGATGCGC CAGTGTCTTG AGGTGCTGCA GGCGTTCAAT
CACCCGGTGG CAATTGTCAC CAAGGGCACT CTGATCGAGC GCGATATTGA TATTCTGACC
GATATGGCGC GCCGCGGCCT GGTGCGAGTC GGGATTTCCG TGACCACGTT GGATGCGAAC
CTGTCGCGGC GGATGGAGCC GCGCGCGCCG GTGCCTGCGC GGCGCCTGGC GACGATCCGA
CGGCTGAGTG CTGCGGGGGT TCCAGTACGC ATAATGACGT CGCCCTTGGT GCCGGGGCTC
ACCGATCACG AGCTTGAGGC GCTATTGGCA GCCGGGCAGG ACGCGGGTGC AGATGCGGCC
AGCTGGATCA TGTTGCGCCT GCCGCGCGAG GTATCGCAGC TCTGGCAGGA CTGGCTTCAA
GAGCATGCAC CCGATCGGGC CGCCAAGGTG ATGGCGCGGC TGCGCGAGAT GCATGGCGGG
CGCGATTACG ATCCGCGCTG GGGGCACCGG ATGCGAGGGG AGGGCGAGTA TGCCGAGATG
ATCGCGCGCC GTTTTCGGCT GGCTTGCAAG CGGCTTGGAT TGGCAGAGCG CACCGCGCCC
CTCAGAACAG ACCTCTTTGC AAAACCGCTG CAGCCCGGCG ATCAGCTCAG CCTGTTTTCC
TGA
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| Protein sequence | MQNTDPFSPR CRKARGALSN AAGRFDLARE AQDDGWWQEA PDPSVATEIR NELARSLISY
NRSPDLPFDR SINPYRGCEQ GCVYCFARPS HAYLGLSPGL DFETRLVARS NAAEVLRKEL
SARSYKVATL AIGTNTDPYQ PCERDHLLMR QCLEVLQAFN HPVAIVTKGT LIERDIDILT
DMARRGLVRV GISVTTLDAN LSRRMEPRAP VPARRLATIR RLSAAGVPVR IMTSPLVPGL
TDHELEALLA AGQDAGADAA SWIMLRLPRE VSQLWQDWLQ EHAPDRAAKV MARLREMHGG
RDYDPRWGHR MRGEGEYAEM IARRFRLACK RLGLAERTAP LRTDLFAKPL QPGDQLSLFS
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