Gene TM1040_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1458 
Symbol 
ID4077755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1556817 
End bp1557053 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content57% 
IMG OID638006769 
ProductSirA-like 
Protein accessionYP_613453 
Protein GI99081299 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000274297 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.357093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA TTGACGCCAC TCTGGATGCC ATCGGCCTCC TCTGCCCTCT GCCCGTACTC 
AAGGCGAGAA AACGTCTTCA ACCGCTTCGC GAAGGGGGTG TTCTGCGCAT CCTCGCTGAT
GATCCGGCCG CAATCATTGA TGTGCCGCAT TTCTGTGCCG AAGCCGGGCA TGAGTTTCTG
GGAATGGAAG AGCAAGATTC CCACCAGGTG TACCTCATCC GCAAGGGCGC AGCCTGA
 
Protein sequence
MTDIDATLDA IGLLCPLPVL KARKRLQPLR EGGVLRILAD DPAAIIDVPH FCAEAGHEFL 
GMEEQDSHQV YLIRKGAA