| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1379 |
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| Symbol | |
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| ID | 4075872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1473238 |
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| End bp | 1474176 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006689 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_613374 |
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| Protein GI | 99081220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATCA AGATCCCCGC TGACCTGCCC GCCTACTCCG TCCTGTCGGA CGAGGGCGTC
ATGGTCATGT CGCCGGATCA AGCGGCGCGT CAGGACATCC GACCGATCAA GATTGGCCTG
CTCAACTTGA TGCCGAAGAA AATTCAGACG GAAAACCAGT TTGCCCGTCT GATTGGGGCG
ACGCCGCTGC AGATCGAGTT CTCCTTGATC CGCATGACCG AGCATCAGAC CAAGAACACC
GCCGCCGCCC ACATGGAAGA GTTTTATCGC CCCTTTCAGG AGGTGCGCGA CGAGAAATTC
GATGGTCTGA TCATCACCGG TGCTCCGATT GAGCATCTGC CGTTCGAGGA CGTCACCTAT
TGGCAGGAGC TCTGCGAGGT CTTTGAGTGG ACGCAGACCA ATGTGCATTC CACCTTTGGC
GTTTGCTGGG GCGGCATGGC GATGATCAAT TACTTTCACG GCGTGCGCAA ACATATGCTG
GATCACAAGG CCTTTGGCTG TTTCCGGCAT CAGAACCTGC AGCCGACCTC GCCCTATCTG
CGCGGGTTTT CGGATGATTT TGTGATCCCC GTGTCGCGCT GGACCGAAAT GAGCCAGAGC
GAGATCGACG CCGCACCGGG TCTGACCACG CTCTTGGGCA GCGCCGATGT CGGCCCCTGC
CTCGTTGAGG ACAAGGCGCA CCGTGCGCTC TATATCTTCA ACCACTTTGA ATATGACAGC
GACACGCTGA AACAAGAATA TGACCGAGAT GTCGCCAGCG GCACCGAGAT CAACGTGCCG
ATCAACTACT ACCCGGACGA CGATCCAAGC CAGCGCCCGC TCAACCGTTG GCGCAGCCAC
GCGCATCTGC TCTATGGCAA CTGGGTGTCT GAAATCTATC AGACGACCCC ATATGATGTG
GAGCGCATCG GTCTCGACAC GACGGACCTT CGGGCCTGA
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| Protein sequence | MPIKIPADLP AYSVLSDEGV MVMSPDQAAR QDIRPIKIGL LNLMPKKIQT ENQFARLIGA
TPLQIEFSLI RMTEHQTKNT AAAHMEEFYR PFQEVRDEKF DGLIITGAPI EHLPFEDVTY
WQELCEVFEW TQTNVHSTFG VCWGGMAMIN YFHGVRKHML DHKAFGCFRH QNLQPTSPYL
RGFSDDFVIP VSRWTEMSQS EIDAAPGLTT LLGSADVGPC LVEDKAHRAL YIFNHFEYDS
DTLKQEYDRD VASGTEINVP INYYPDDDPS QRPLNRWRSH AHLLYGNWVS EIYQTTPYDV
ERIGLDTTDL RA
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