Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1364 |
Symbol | |
ID | 4076381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1458902 |
End bp | 1460050 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638006674 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_613359 |
Protein GI | 99081205 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCG CCGTATTGAT CGTTGCCGCC GGCAAAGGCA CCCGCGCAGG CGGTGGTCTC GCCAAGCAAT GGCGCCCACT GGCCGGGCGA CTGGTCATCG ACTGGACGAT CGAGGCCTTT CAACGTGCGG GGTGCGGCAC CATCATGGTT GTGCGCGATC CCGACAATGA GCACGCGATC GAGGCGCTTG CGCCCTACCC TGAATTATTG CTCGCAGATG GCGGTCCCTC GCGGTCTGAA TCCGTGCGTA ACGGTTTGAT TGCGCTCCAA GAGATCGGTG TCGAACGCGT TCTTATTCAT GACGCGGCGC GTCCATGTGT GTGTCCTCAG GTGATCCAAC AGGTGCTCGA CGCACTTGAT GACACGCCTG CTGCCGCGCC AGGACTTGCG GTGACAGATG CGCTTTGGAC CGGGGCCGAT GGCCATGTCA CAGGCACGCA GGACCGAAGC GCGCTCTTTG CGGCGCAAAC GCCGCAAGGC TTTCATTTTG ACGCGATCCT TGCGGCGCAT ATGCGCCACG ACGGCACCGC AGCGGATGAT GTCGAGGTTG CCCGTCAAGC GGGGCTCGCG GTCCGTATCA CGCCGGGTGA CGTCAATAAT ATCAAGATCA CCCGGCCCGA AGATTTCTCC CGCGCCGAGC ACATATTGAG GAGCACCATG GACAACATTC CTGACATCAG GCTTGGAAAT GGCTATGACG TTCACCGGTT CGGACCCGGG GATCATGTCA TGCTCTGTGG GGTTCAAGTG CCGCATGAGC GCGGTCTGCA AGGCCATTCC GATGCGGATG TGGGCATGCA CGCGGTCACC GACGCACTCT ACGGGGCGAT GGCAGAGGGC GACATCGGCC GCCACTTCCC GCCAAGCGAC CCTCAGTGGA AAGGCGCGGC GTCGGACATC TTCCTGCGCC ATGCGGTCGA ATTGGCACGC TCCAAAGGGT TCACCATCAA TAACGTGGAT TGCACCCTCG TCTGTGAATA CCCCAAAGTC GGCCCCCACG CAGAGGCGAT GCGCGCCCGG ATGGCAGAGA TCATGGGCAT GGATATGGGA CGCCTCTCGA TCAAGGCGAC AACTTCAGAG CGGCTTGGGT TCACCGGTCG CAAAGAAGGC ATCGCGGCAC TGGCGACAGC AACATTGGTG CGGGCATGA
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Protein sequence | MTLAVLIVAA GKGTRAGGGL AKQWRPLAGR LVIDWTIEAF QRAGCGTIMV VRDPDNEHAI EALAPYPELL LADGGPSRSE SVRNGLIALQ EIGVERVLIH DAARPCVCPQ VIQQVLDALD DTPAAAPGLA VTDALWTGAD GHVTGTQDRS ALFAAQTPQG FHFDAILAAH MRHDGTAADD VEVARQAGLA VRITPGDVNN IKITRPEDFS RAEHILRSTM DNIPDIRLGN GYDVHRFGPG DHVMLCGVQV PHERGLQGHS DADVGMHAVT DALYGAMAEG DIGRHFPPSD PQWKGAASDI FLRHAVELAR SKGFTINNVD CTLVCEYPKV GPHAEAMRAR MAEIMGMDMG RLSIKATTSE RLGFTGRKEG IAALATATLV RA
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