| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1358 |
|---|
| Symbol | trkA |
|---|
| ID | 4076375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1449969 |
|---|
| End bp | 1451345 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638006668 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_613353 |
|---|
| Protein GI | 99081199 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA TCATCTGTGG AGCCGGGCAG GTCGGTTGGC AGATCGCACG GCATTTGTCC
GGCGAACACA ACGACGTGAC GGTTGTCGAC AACAATCCTG ACCTTGTGCG CCGCGCGACA
GATACGCTTG ATGTTCAAGG CATTGCGGGC TTTGCCTCAT ATCCGGATGT TCTTGATCGG
GCCGGGGCGC GGGACGCGGA TATGATCATC GCCGCCACGC ACTCGGACGA GGTGAACATG
GTCACCTGCC AAGTGGCGCA TTCCGTGTTT GCCATCCAGC GCAAGATCGC GCGTCTGCGG
GCCAAGAGCT ATCTGAACGC GATTTATTCC GATCTCTATC GCCGGGACCA TCTGCCGATC
GATGTGGTGA TCAGCCCGGA GCGGGAAGTT GCGGCGGCGG CTATGCAGCG TCTGCGCGCG
CCGGCAGCTT TTGACACCGA AGTATTCATG GACGGACGTG CGCAGCTGTT GGGCATCAAC
GTGGAGGCAG ACTGCCCCGT TGTAAACACG CCGCTGCGCC AGTTGACGGA GCTCTTCTCG
ACGTTGCGTG CCATTGTGGT TGGCATTCGC CGCGACGGAT CGCTGTTTGC GCCGGAGCCA
GGGGATCAAC TGTTTGTGGG CGATGCGGCC TATGTGTTTT GCCATGCAGA CGACGTGAGC
CGCACGATGG AAGTCTTTGG AAAGACTGAG AAACGTCAGG AGCGCGTGGT GATCGTCGGC
GGCGGCAATG TCGGCCTTGA AGTTGCCAAA GCGCTCGAGG CGCGCACCCG GCGCACGCGG
GCCAAGATGA TCGAAAAGAA CCGCAAAAAC GCCGAGGTTG CCGCAGAGGC TCTGGAACGC
ACGATCGTTC TGAATGGCGA TGGTCTGGAT CGGGGGCTGA TGATCGAGGC GGGCATCGAC
AAGGCCGATG CCATGCTGGC GGTGACCGAT GACGACAAGA CCAACATGCT GGCAGCGGTG
CGTGCCAAGA CCGAAGGCTG CCCGTTTGCA ATCGCCCTGA TCAACGACCC GACGCTGCTG
CCGCTGCTGC CGCACCTCGG GATTGACGCG CATATCAATC CGCGCGCCAC CACCGTCAGT
TCTATCCTGC GTCACATCCG CTATGGCCGT ATCCGGCAGG TTTATTCCAT TGGCGACGCC
GAAGCGGAAG TTATTGAAAC CGAAGTGCTT TCTACCTCTC CCATGGCGGG GCAGGCCATT
CGGGACATTG ATTTCCCCGA AGGTGTGCTG GTGGGCGCTG TATCCAAGAA CGGCGAGGTC
ATGCGCCCCA GTGGCGGGCT TCGGATCGAG GCGGGGGACA CGATTGCCCT CTTTGCGATG
GCCGCTGATG TGCGGGAGGT CGAGCGCCTG ATGCAAGTCT CGATCGACTA CTTCTAG
|
|---|
| Protein sequence | MKVIICGAGQ VGWQIARHLS GEHNDVTVVD NNPDLVRRAT DTLDVQGIAG FASYPDVLDR
AGARDADMII AATHSDEVNM VTCQVAHSVF AIQRKIARLR AKSYLNAIYS DLYRRDHLPI
DVVISPEREV AAAAMQRLRA PAAFDTEVFM DGRAQLLGIN VEADCPVVNT PLRQLTELFS
TLRAIVVGIR RDGSLFAPEP GDQLFVGDAA YVFCHADDVS RTMEVFGKTE KRQERVVIVG
GGNVGLEVAK ALEARTRRTR AKMIEKNRKN AEVAAEALER TIVLNGDGLD RGLMIEAGID
KADAMLAVTD DDKTNMLAAV RAKTEGCPFA IALINDPTLL PLLPHLGIDA HINPRATTVS
SILRHIRYGR IRQVYSIGDA EAEVIETEVL STSPMAGQAI RDIDFPEGVL VGAVSKNGEV
MRPSGGLRIE AGDTIALFAM AADVREVERL MQVSIDYF
|
|---|
| |