Gene TM1040_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1347 
Symbol 
ID4075918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1435162 
End bp1435863 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content57% 
IMG OID638006657 
ProductDSBA oxidoreductase 
Protein accessionYP_613342 
Protein GI99081188 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC CGCTTGCGCA AGTGAAACTC GATATTCTGT CGGATCCGAT CTGCCCCTGG 
TGCTATATCG GCAAGACCCA TCTGGACCGC GCTCTGGCAG AGGCGCCGGA TCATCCTTTT
GTGATCGAGT GGCACCCGTT CCAGCTCAAT CCTGATATGC CAGGCGATGG CATGGACCGC
CGCACCTATC TGGAAACGAA ATTTGGTGGC AAAGACAACG CGGTAAAGGT CTATGCTCAG
ATCGCGGAGC ATGCGCAGGC CGCGGGTGTC GAGATCAACT TCGAAGCCAT GCAGCGCACC
CCGAACACGA TCAACGCGCA TCGTCTGATC CATTGGGCCG GATTGGAAGC CAAACAATCC
GACGTCGTCG ACGCTCTGTT CAAAGCCTAT TTCGTCGAGG GCAAGGATAT TGGCGATCCC
GTGGTGCTCG CCGATCTGGC CGAACAAGCA GGCATGGAGC GCGCCGTAGT TGAGCGTCTT
CTGAGTGGTG ATAGCGATGC AGAGGACATC CGCGCACGCG ACGCGCATTC GCGCAAGATG
GGTGTCAATT CGGTCCCGAC ATTTGTGATT GCCAATCAAC ATGTGGTGCC GGGTGCGCAA
CAGCCCGAGC TCTGGGCGCA GGTCATAGCG GATATTCGCG CTCAACTTGA ACAATCGGCC
GCCGCATCAG ACTCGCCTGA AGAAGGTGAT GCAGTGCATT AA
 
Protein sequence
MTEPLAQVKL DILSDPICPW CYIGKTHLDR ALAEAPDHPF VIEWHPFQLN PDMPGDGMDR 
RTYLETKFGG KDNAVKVYAQ IAEHAQAAGV EINFEAMQRT PNTINAHRLI HWAGLEAKQS
DVVDALFKAY FVEGKDIGDP VVLADLAEQA GMERAVVERL LSGDSDAEDI RARDAHSRKM
GVNSVPTFVI ANQHVVPGAQ QPELWAQVIA DIRAQLEQSA AASDSPEEGD AVH